Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1109 ATGGACCCCGAAACTAGCTTTTTCCTCAAACCCATTTTCACACATGGGCTCTCTGGTTCACTACACCTGGTGTTGCTACTTGTGCTGGTTCTATCATGGCTATGTCAGAAAGCGCAGGCAAGCCATGGAGAAAGTGCAAGAAAAGGAGTCTCTAATGCTGGGATTGTGTTCTACAAACAGTCTCTGTTCTGTAGTTTAGCTGTTTGTGTGTTTAATCTTGTATTGTCCTTATTGAGCTACTTTTATTGGTACAAGAATGATAGCTTAGAAGAGATTGTTATGCTTTCTAATTTTGTAATTGAAGCAGTTGCCTGGGGTGCCCTTTGTGTTTATTTGCGTTCTAGATTTTCCAATTCCGGGGAACAAAACTTGCCCTATTTCTCGAGAGTTTGGTGCTGGGTTTACTCCTTTCTTTCTTGTTTTTGCCTTGTCATAGACTTTGTACTCCATAGACAACATCTTTTCCTTCCATTCATATACCTTGTTTCTGACGTTGGATCCTGTCTCACTGGTTTGTTTCTATGTTATGTGGTATGTTCTGCTAACAATGCAAAATGTGTGCTTCTTGAAGAACCCCTTTTGAATGGTGATTCTACCGTAAGCGACAATGCTGAGTCACATAAGAATACCCCATATTCAAATGCTGGATTTCTCAGTATTCTTACTTTCTCTTGGATGAGTCCTTTAATTGCTACAGGAAATAACAAGACTTTAGACCTTGAGGACCTCCCCCTGCTTTCTAGCGATGACAGTGCTTATGGGGCATTTCCCACTTTTAGAAAAAACCTTGAATCGGAGGGTACTCTTACCAGAGTGACCACTCTTACACTGGCGAAGGCATTAGTCTTCTCAACATGGAAAGGGATTGTTTTATCAGCTTTATTTGCATTCTTATTCACATGTGCTTCTTACATTGGCCCCTTTCTTATTGACGTCTTTGTTCAATACCTCAATGGGCAGCAAAAGTTTAAAAATGAGGGTTATGTTTTGGCAATTGCATTTTTCGGTGCAAAGCTTGTAGAGTGCCTTTCACAGAGGCACTGGATATTTAGATTCCAGCAAGTTGGGGTTAGAGTTCAATCAATGTTGGTGGCAATGATCTACTCCAAAGGACTGACCCTATCATGTCAATCAAAGAAGGGTCGCACAAGTGGGGAAATCATCAACTTAATGACTGTTGATGCTGCTAGAGTAGGTGAGTCTGTTTGGTACTTGCATGATCCATGGATGGCTGTTCTGCAAGTTACTCTGGCCTTGATTATTCTGTATAGAAGTGTTGGAATTGCTTCAATAGCTACTTTTCTTTCTACTGTTCTTCTGATGTTGGCAAACTTGCCCTTGGGGTCAATGCAAGAGAAGTTCCAAGGCAAGTTTATGGAGTCAAAAGACACAAGAATGAAGGCCACTTCTGAGATTCTAAGGAACATGAGGATTCTAAAGTTGCAAGCATGGGAGATGAAGTTTCTTTCAAGGGTTATTGAGATTAGGAAGATTGAGACAGGATGGCTAAAGAAGTTTTTATTCAGTACAGGAATGACAAGATTCCTTTTCTCCTCTGCTCCAACTTTTATTGCTATGATTACTTTTGGTGCTTGTATTCTCATAGGTATCCCACTTGATTCAGGGAAGATTTTATCTGCACTTGCAATATTCAGAATTCTTCAGCAGCCCATCTATAGTCTACCTGATACAATCTCAATGATAGCACAGACTAAGGTTTCCCTTGACCGGATTGCGTCGTTCCTTTGTCTCGAAGACTTGCAATCTGATGTTATAGAGAAGCTTCCAAGGGGTAGTTCTGATACAGCAATTGAGATAGTTGATGGTAATTTCTCGTGGGATTTATCCTCATCTGTTCCCACGTTGCAAGATATAAATGTCAAAGTTGTCCATGGCTTCAGGGTTGCAGTTTGTGGCACCGTTGGTTCAGGAAAGTCAAGTCTAATTTCTTGCATACTAGGAGAAGTAACAAAGCTCTTAGGGACACTAAAGAGGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCTCGTGCTCTGTACCAAGATGCTGATATATATCTGCTTGATGATCCTTTCAGTGCTGTGGACGCCCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTGGAATTCTTACCTGATGCTGATCTAATATTGGTAATGAGAGATGGAAAAATAACTCAATCAGGGAAGTACAATGACATCCTCAACTCAGGCACAGATTTTATGGATCTTGTAGGTGCACACAGAGAAGCCTTGTCTGCACTTAATCAATTAGAGAGGAAACCCACCTCTAAAAAATTGAGTGTCACAGTGGATGACACGGATTCATTAAGTGCATTTTCACTTGAGGAAAAAGTGGAAAACAAAGATGTTCAAAATGGTAAAAGAGATGATACAGTTGGACCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGTAAAGTTGGGTTTGAAGTCTACTGGAAATACATCACAACAGCATATGGAGGAGCTTTAGTTCCCTTCATATTACTCTTGCAAGTTCTTTACCAGGCTCTGCAAATTGGGAGCAATTATTGGATGGCATTTGCAACTCCTGTATCAGCAACTGAGGAGCCTCCTGTTCGAAGCTTTACACTTATGGTTGTCTACGTTGCTCTGGGAATTGGAAGTGCCTTGTGCAACCTTGTTAGAACAATGCTTGTTTTGATAACTGGATACAAGACAGCCACAATACTCTTCAATAAGTTGCATTTGTGCTTCTTCCGAGCCCCCATGTCATTTTTTGATTCCACTCCAAGCGGGCGAATCCTAAATAGAGCTTCTACAGACCAAAGTGCCATAGATATGAACGTTCCAGTTTTAGTAGCGGCAGTTCCCATCTATATTATTCAGCTTTTGGGAAATATTGCTGTGATGTCTCAAGTTGCATGGCAGGTTTTTATAGTATTTATTCCTGTGATTGCAGCTTGCATCTGGTATCAGCAATATTACTCAGAATCAGCCCGAGAATTGTCACGATTGGTTGGTATATGCGAAGCTCCAGTCATACAACACTTTTCTGAAACCATTTCTGGATCAACAACCATTAGAAGTTTCGACCAAGAATCAAGATTTCAGGACACAAATAAGAAATTGATAGACAGATATTCCAAGCCCAAGTTATACACCACAACTGCAATGGAATGGCTGTGCTTTCGGTTGGATATGTTATCTTCTATCACATTTGCATTCAGTTTGGTTTTCTTGATATCTTTTCCAGATGCAATTAGCAATCCTGGTATTGCTGGCCTGGCTGTGACATATGGGCTTAATCTAAACACACTGCAAGCTGGATTAATTTGGTGTCTTTGTAATATGGAGAACAAAATTATATCAGTAGAAAGAATATTTCAGTACACTAACATCCCAAGTGAGCCTCCTCTTGTACAAGAAGAAAATAGACCAGATTATTCTTGGCCATCAGCTGGAGAGGTTCATATCCAGGATTTGCAGGTTCGGTATGCTCTGCATTTGCCTCTAGTGTTGCGTGGTCTTACATGCACTTTCACTGCTGAAGGAAAAACAGGCATTGTGGGGAGAACGGGCAGTGGAAAATCAACTCTAGTACAAACACTTTTCCGACTTGTTGAACCTTCTGCTGGTCATATATTGATAGATAGCATTGATATCTCTTTGATTGGACTTCATGATTTACGCTCTAGAATAAGCATTATTCCTCAGGATCCAACAATGTTTCAAGGGACTTTAAGAAGTAATCTAGATCCACTGGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTTGATATGTGCCAACTTGGAGATGAAGTAAGGAAGAAGGAAAGCAAGCTCGATTCCATGGTTACTGAGAATGGAGATAATTGGAGTATGGGTCAGAGGCAGCTGGTCTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAGCATTATTCAGCAAACCATCAAGCAACATTTTTCAGAATGTACAGTTATTACCATTGCGCACAGAATAACTTCTATCCTTGATAATGACATGGTTCTGGTTCTAAGCCAAGGGCTAATTGAAGAATATGATTCGCCAAAAAGATTGCTTGAGAACAAATCTTCATCTCTTGCTCAGCTAGTTGCAGAATACACTCGCAGGTCGAAGTTGAGTTGA 4254 0.4069 MDPETSFFLKPIFTHGLSGSLHLVLLLVLVLSWLCQKAQASHGESARKGVSNAGIVFYKQSLFCSLAVCVFNLVLSLLSYFYWYKNDSLEEIVMLSNFVIEAVAWGALCVYLRSRFSNSGEQNLPYFSRVWCWVYSFLSCFCLVIDFVLHRQHLFLPFIYLVSDVGSCLTGLFLCYVVCSANNAKCVLLEEPLLNGDSTVSDNAESHKNTPYSNAGFLSILTFSWMSPLIATGNNKTLDLEDLPLLSSDDSAYGAFPTFRKNLESEGTLTRVTTLTLAKALVFSTWKGIVLSALFAFLFTCASYIGPFLIDVFVQYLNGQQKFKNEGYVLAIAFFGAKLVECLSQRHWIFRFQQVGVRVQSMLVAMIYSKGLTLSCQSKKGRTSGEIINLMTVDAARVGESVWYLHDPWMAVLQVTLALIILYRSVGIASIATFLSTVLLMLANLPLGSMQEKFQGKFMESKDTRMKATSEILRNMRILKLQAWEMKFLSRVIEIRKIETGWLKKFLFSTGMTRFLFSSAPTFIAMITFGACILIGIPLDSGKILSALAIFRILQQPIYSLPDTISMIAQTKVSLDRIASFLCLEDLQSDVIEKLPRGSSDTAIEIVDGNFSWDLSSSVPTLQDINVKVVHGFRVAVCGTVGSGKSSLISCILGEVTKLLGTLKRGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKITQSGKYNDILNSGTDFMDLVGAHREALSALNQLERKPTSKKLSVTVDDTDSLSAFSLEEKVENKDVQNGKRDDTVGPKGQLVQEEEREKGKVGFEVYWKYITTAYGGALVPFILLLQVLYQALQIGSNYWMAFATPVSATEEPPVRSFTLMVVYVALGIGSALCNLVRTMLVLITGYKTATILFNKLHLCFFRAPMSFFDSTPSGRILNRASTDQSAIDMNVPVLVAAVPIYIIQLLGNIAVMSQVAWQVFIVFIPVIAACIWYQQYYSESARELSRLVGICEAPVIQHFSETISGSTTIRSFDQESRFQDTNKKLIDRYSKPKLYTTTAMEWLCFRLDMLSSITFAFSLVFLISFPDAISNPGIAGLAVTYGLNLNTLQAGLIWCLCNMENKIISVERIFQYTNIPSEPPLVQEENRPDYSWPSAGEVHIQDLQVRYALHLPLVLRGLTCTFTAEGKTGIVGRTGSGKSTLVQTLFRLVEPSAGHILIDSIDISLIGLHDLRSRISIIPQDPTMFQGTLRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKESKLDSMVTENGDNWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDSIIQQTIKQHFSECTVITIAHRITSILDNDMVLVLSQGLIEEYDSPKRLLENKSSSLAQLVAEYTRRSKLS 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1109 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 592 758 IPR027417 -
Bisa10g1109 1417 ProSitePatterns ABC transporters family signature. 669 683 IPR017871 GO:0005524|GO:0016887
Bisa10g1109 1417 FunFam ABC transporter C family member 3 1157 1409 - -
Bisa10g1109 1417 FunFam ABC transporter C family member 5 819 1155 - -
Bisa10g1109 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1165 1400 IPR027417 -
Bisa10g1109 1417 Pfam ABC transporter 666 696 IPR003439 GO:0005524
Bisa10g1109 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 473 767 IPR003439 GO:0005524
Bisa10g1109 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 290 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1109 1417 Gene3D ABC transporter type 1, transmembrane domain 262 586 IPR036640 GO:0005524|GO:0016020
Bisa10g1109 1417 Gene3D ABC transporter type 1, transmembrane domain 820 1155 IPR036640 GO:0005524|GO:0016020
Bisa10g1109 1417 CDD ABC_6TM_ABCC_D1 291 578 IPR044746 GO:0140359
Bisa10g1109 1417 CDD ABC_6TM_ABCC_D2 855 1149 IPR044726 GO:0140359
Bisa10g1109 1417 Pfam ABC transporter transmembrane region 857 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1109 1417 Pfam ABC transporter transmembrane region 290 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1109 1417 Pfam ABC transporter 1192 1339 IPR003439 GO:0005524
Bisa10g1109 1417 SUPERFAMILY ABC transporter transmembrane region 855 1156 IPR036640 GO:0005524|GO:0016020
Bisa10g1109 1417 Gene3D - 591 660 IPR027417 -
Bisa10g1109 1417 Gene3D - 661 791 IPR027417 -
Bisa10g1109 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1174 1408 IPR003439 GO:0005524
Bisa10g1109 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 857 1137 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1109 1417 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 664 1408 - -
Bisa10g1109 1417 SUPERFAMILY ABC transporter transmembrane region 283 583 IPR036640 GO:0005524|GO:0016020
Bisa10g1109 1417 CDD ABCC_MRP_domain2 1172 1392 - -
Bisa10g1109 1417 Gene3D - 1157 1410 IPR027417 -
Bisa10g1109 1417 SMART AAA_5 1200 1385 IPR003593 GO:0016887
Bisa10g1109 1417 SMART AAA_5 631 744 IPR003593 GO:0016887
Bisa10g1109 1417 FunFam ABC transporter C family member 10 273 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1109 Bisa-ChrBisa10 27315641 27322292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1109 664 790 Calmodulin-binding Proteins AT2G36910 32.331 1.43e-15 80.9