Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1108 ATGAACCCCGAAACTAGCTTTTTCCTCAAACCCATTTTTACACATGGGTTCTCTGGTTCAATACACTTGGTGTTGCTAGTTGTGCTGGTTATATCATGGCTATGTCAGAAAGCCCAGGCAAGCCATGGAGAAAGTGCAAGAAAAGGAGTCTCTAATGCTGGGATTGTGTTCTACAAACAGACTCTCTTCTGTAGTTTAGCTGTTTGTGTCTTTAAACTTGTATTGTCCTTATTGAGCTACTATTATTGGTACAAGAATGATAGCTTAGAAGAGATTGTTATGCATTCGAATTTTGCAATTGAAGCAGTTGTCTGGGGTGCCCTTTGTGTTTATTTGCGTTCTAGATTTTCCAATTCCGGGGAGCAAAACTTGCCCTATTTCTTGAGAGTTTGGTGCTGGGTTTACTGCTTTCTTTCTTGTTTTTGCCTTGTCATAGACTTTGTACTCCATAGACAACATCCTTTCCTTTCAATCATATACCTTGTTTCTGATGTCGGATCCTCTCTCACAGGTTTGTTTCTATGTTATGTGGTATGTTCTGCTAACAGTGCAAAATGTGTGCTTCTTGAAGAACCCCTTTTGAATGGTGATTCTAGCGTAAACAACAATGCTGAGTCACATAAGAATACCCCATATTCAAAGGCTGGATTTTTCAGTATTCTTACTTTCTCATGGATGAGTCCTTTAATTGCTATAGGAAATAAGAAGACTTTAGACCTTGAGGATCTCCCTTTGCTTTCTAGCGATGACAGTGCTTATGGGGCATTTCCCACTTTTAGAAAAAACCTTGAATCAGAGGGTACTCTTACCAGAGTGACCACTCTTACACTGGCGAAGGCATTAGTCTTCTCAACATGGAAAGGGATTCTTTTATCAGCTTTATTTGCATTCTTATTCACATGTGCTTCTTACATTGGCCCCTTTCTTATTGACATCTTTGTTCAATACCTCAATGGGCAGCAAAAGTTTAAAAATGAGGGTTATGTTTTGGCAATTGCATTTTTTGGTGCAAAGCTTATCGAGTGCCTTTCACAGAGGCACTGGATGTTTAGATTCCAGCAAGTTGGGGTTAGAGTTCAATCCATGTTGGTGGCAATGATCTACACCAAAGGATTGACCCTATCATGTCAATCAAAGAAGGGTCGCACAAGTGGGGAAATCATCAACTTAATGACTGTTGATGCTACTAGACTAGGTGAGTTTGTTCGGTACATGCATGATCCATGGATGGCTGTTCTGCAAGTTACTCTGGCCTTGATTATTCTGTATAGAAGTGTTGGAATTGCTTCAATAGCTACTTTTCTTTCTACTGTTCTGATGATGTTGGCAAACTTGCCCTTGGGGTCAATGCAAGAGAAGTTCCAACGTAAGTTTATGGAGTCAAAAGATACAAGAATGAAGGCCACTTCTGAGATTCTAAGGAACATGAGGATTCTAAAGTTGCAAGCATGGGAGATGAAGTTTCTTTCAAGGGTTATTGAGATTAGGAAGATTGAGACAGGATGGCTAAAGAAGTTTCTATTCACTACAGGAATGACAAGATTCCTTTTATCTTCTGCTCCAACTTCTATTGCTATGGTTACTTTTGGTTCTTGTATTCTGATAGGTATCCCACTTGATTCAGGGAAGATTTTATCTGCACTTGTAATATTCAGAATTCTTCAGCAGCCCATCTATAATCTACCTGATACAATCTCAATGATAGCACAAACCAAGGTTTCCCTTGACCGGATTTCATCATTCCTTTGTCTCGAAGACTTGCAATCTGATGTTATAGAGAAGCTTCCAAGGGGTAGTTCTGATACAGCAATTGAGATAGTTGATGGTAATTTCTCGTGGGATTTATCCCCATCCGTTCCCACATTGCAAGATATAAATGTCAAAGTTGTCCACGGCTTCAGGGTTGCAGTTTGTGGCACCGTTGGTTCAGGAAAGTCAAGTCTAATTTCTTGCATTCTAGGAGAAGTAATAAAGCTCTCTGGGACACTAAAGGTGTGTGGAACAACCGCTTATGTTGCTCAATCCCCATGGATACAAAGTGGCAAGATAGTAGAGAACATACTATTTGGTAAAGAGATGGACAGGGAAAAATATGAGAAGGTTCTAGAAGCGTGTTCCTTGACAAAAGACCTAGAGGTTCTACCATTTGGTGATCAAACCATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCTCGTGCTCTGTACCAAGATGCTGATATATATCTGCTTGATGATCCTTTCAGTGCTGTGGACGCCCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTAGAATTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAAAATAACTCAATCAGGGAAGTACAATGACATCCTCAACTCAGGCACAGATTTTATGGAGCTTGTAGGTGCACACAGAGAAGCCTTGTCTGCAATTAATCAATTAGAGAGGAAACCCACCTCTAAAAAATTGAGTGTCACAGTGGATGACACGGATTCATTAAGTGCATTTTCACTTGAGGAAAAAGTGGAAAACAAAGATGTTCAAAATGGTAAAAGAGATGGTACGGTTGGACCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGTAAAGTTGGGTTTGAAGTCTACTGGAAATACATCACAACAGCATATGGAGGAGCTTTAGTTCCCTTCATATTACTCTTGCAAGTTCTTTATCAGGCTCTGCAAATTGGGAGCAATTATTGGATGGCATGGGCAACTCCTGTATCAGCAACTGAGGACCCTATTGTTCGAAGCTTTACACTTATGGTTGTCTATGTTTCTCTGGGAATTGGAAGTGCCTTGTGCAACCTTGTTAGAACAATGCTTATTTTAATAGCTGGATACAAGACAGCCACAATACTCTTCAATAAGTTGCATTTGTGCTTCTTCCGAGCCCCCATGTCATTTTTTGATTCCACTCCAAGCGGGCGAATCCTAAATAGAGCTTCTACAGATCAAAGTGCCATAGATATGAACGTTCCATTGTTAGTAGCGGCAGTTGCCGTCTATCTTATTCATCTTTTGGGAAATATTGCTGTGATGTCTCAAGTTGCATGGCAGGTTTTTATACTATTTATTCCTGTGATTGCAGCTTGCATCTGGTATCAGCAATACTACTCAGAATCAGCCAGAGAATTGTCACGATTGGTTGGTATATGCCAAGCTCCAGTCATACAACACTTTTCTGAAACCATTTCTGGATCAACAACCATTAGAAGTTTCGACCAAGAATCAAGATTTCAGGACACAAATAAGAAATTGATAGACAGATATTCCAAGCCCAAGTTATACACTGCAACTGCAATGGAATGGCTGTGCTTTCGGTTGGATATGTTATCTTCTATCACATTTGCATTCAGTTTGGTTTTCTTGATATCTTTTCCAGATGAAATTAGCAATCCTGGTATTGCTGGCCTGGCTGTGACATATGGGCTTAATCTAAACACACTGCAAGCTGGACTAATTTGGTGTCTTTGTAATATGGAGAACAAAATTATATCAGTTGAAAGAATATTTCAGTACACTAACATCCCAAGTGAGCCTCATCTTGTAATAGAAGAAAATAGACCAGATTCTTCTTGGCCATCAGCTGGAGAGGTTCGTATCCAGGATTTGCAGGTTCGGTATGCTCTGCATTTGCCTCTAGTGTTGCGTGGTCTTACATGCACTTTCACTGCTGGAAGAAAAACAGGCATTGTGGGGAGAACGGGCAGTGGAAAATCAACTCTAGTACAAACACTTTTCCGACTTGTTGAACCTTCTGCTGGTCATATATTGATAGATAGCATTGATATCTCTTTGATTGGACTTCATGATTTACGCTCCAGAATAAGCATTATTCCTCAGGATCCAACAATGTTTCAAGGGACTTTAAGAAGTAATCTAGATCCACTAGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTTGATATGTGCCAACTTGGAGATGAAGTAAGGAAGAAGGAAAGCAAGCTCGATTCCACGGTTACTGAAAACGGAGATAACTGGAGTATGGGTCAGAGGCAGCTGGTCTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAGCATTATTCAGCAAACTATCAAGCAACATTTTTCAGAATGTACAGTTATTACCATTGCGCACAGAATAACTTCTATCCTAGATAGTGACATGGTTCTGGTTCTAAGCCAAGGGCTAATTGAAGAATATGATTCGCCAAAAAGATTGCTTGAGAACAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACTCTCGCAGGTCGAAGTTGAGTTGA 4434 0.4028 MNPETSFFLKPIFTHGFSGSIHLVLLVVLVISWLCQKAQASHGESARKGVSNAGIVFYKQTLFCSLAVCVFKLVLSLLSYYYWYKNDSLEEIVMHSNFAIEAVVWGALCVYLRSRFSNSGEQNLPYFLRVWCWVYCFLSCFCLVIDFVLHRQHPFLSIIYLVSDVGSSLTGLFLCYVVCSANSAKCVLLEEPLLNGDSSVNNNAESHKNTPYSKAGFFSILTFSWMSPLIAIGNKKTLDLEDLPLLSSDDSAYGAFPTFRKNLESEGTLTRVTTLTLAKALVFSTWKGILLSALFAFLFTCASYIGPFLIDIFVQYLNGQQKFKNEGYVLAIAFFGAKLIECLSQRHWMFRFQQVGVRVQSMLVAMIYTKGLTLSCQSKKGRTSGEIINLMTVDATRLGEFVRYMHDPWMAVLQVTLALIILYRSVGIASIATFLSTVLMMLANLPLGSMQEKFQRKFMESKDTRMKATSEILRNMRILKLQAWEMKFLSRVIEIRKIETGWLKKFLFTTGMTRFLLSSAPTSIAMVTFGSCILIGIPLDSGKILSALVIFRILQQPIYNLPDTISMIAQTKVSLDRISSFLCLEDLQSDVIEKLPRGSSDTAIEIVDGNFSWDLSPSVPTLQDINVKVVHGFRVAVCGTVGSGKSSLISCILGEVIKLSGTLKVCGTTAYVAQSPWIQSGKIVENILFGKEMDREKYEKVLEACSLTKDLEVLPFGDQTIIGERGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKITQSGKYNDILNSGTDFMELVGAHREALSAINQLERKPTSKKLSVTVDDTDSLSAFSLEEKVENKDVQNGKRDGTVGPKGQLVQEEEREKGKVGFEVYWKYITTAYGGALVPFILLLQVLYQALQIGSNYWMAWATPVSATEDPIVRSFTLMVVYVSLGIGSALCNLVRTMLILIAGYKTATILFNKLHLCFFRAPMSFFDSTPSGRILNRASTDQSAIDMNVPLLVAAVAVYLIHLLGNIAVMSQVAWQVFILFIPVIAACIWYQQYYSESARELSRLVGICQAPVIQHFSETISGSTTIRSFDQESRFQDTNKKLIDRYSKPKLYTATAMEWLCFRLDMLSSITFAFSLVFLISFPDEISNPGIAGLAVTYGLNLNTLQAGLIWCLCNMENKIISVERIFQYTNIPSEPHLVIEENRPDSSWPSAGEVRIQDLQVRYALHLPLVLRGLTCTFTAGRKTGIVGRTGSGKSTLVQTLFRLVEPSAGHILIDSIDISLIGLHDLRSRISIIPQDPTMFQGTLRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKESKLDSTVTENGDNWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDSIIQQTIKQHFSECTVITIAHRITSILDSDMVLVLSQGLIEEYDSPKRLLENKSSSLAQLVAEYSRRSKLS 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1108 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1227 1460 IPR027417 -
Bisa10g1108 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1197 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1108 1477 ProSitePatterns ABC transporters family signature. 729 743 IPR017871 GO:0005524|GO:0016887
Bisa10g1108 1477 CDD ABC_6TM_ABCC_D2 915 1209 IPR044726 GO:0140359
Bisa10g1108 1477 Pfam ABC transporter 1252 1399 IPR003439 GO:0005524
Bisa10g1108 1477 Pfam ABC transporter 622 756 IPR003439 GO:0005524
Bisa10g1108 1477 CDD ABC_6TM_ABCC_D1 291 578 IPR044746 GO:0140359
Bisa10g1108 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 290 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1108 1477 FunFam ABC transporter C family member 5 589 836 - -
Bisa10g1108 1477 Gene3D ABC transporter type 1, transmembrane domain 880 1215 IPR036640 GO:0005524|GO:0016020
Bisa10g1108 1477 Gene3D ABC transporter type 1, transmembrane domain 262 585 IPR036640 GO:0005524|GO:0016020
Bisa10g1108 1477 SMART AAA_5 1260 1445 IPR003593 GO:0016887
Bisa10g1108 1477 SMART AAA_5 631 804 IPR003593 GO:0016887
Bisa10g1108 1477 FunFam ABC transporter C family member 3 1217 1469 - -
Bisa10g1108 1477 Gene3D - 1217 1470 IPR027417 -
Bisa10g1108 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 826 IPR027417 -
Bisa10g1108 1477 Pfam ABC transporter transmembrane region 290 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1108 1477 Pfam ABC transporter transmembrane region 918 1160 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1108 1477 Gene3D - 586 851 IPR027417 -
Bisa10g1108 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1234 1468 IPR003439 GO:0005524
Bisa10g1108 1477 SUPERFAMILY ABC transporter transmembrane region 283 583 IPR036640 GO:0005524|GO:0016020
Bisa10g1108 1477 CDD ABCC_MRP_domain1 604 804 - -
Bisa10g1108 1477 SUPERFAMILY ABC transporter transmembrane region 915 1215 IPR036640 GO:0005524|GO:0016020
Bisa10g1108 1477 FunFam ABC transporter C family member 10 273 586 - -
Bisa10g1108 1477 FunFam ABC transporter C family member 5 879 1215 - -
Bisa10g1108 1477 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 212 1469 - -
Bisa10g1108 1477 CDD ABCC_MRP_domain2 1232 1452 - -
Bisa10g1108 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 827 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1108 Bisa-ChrBisa10 27190736 27197523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1108 604 850 Calmodulin-binding Proteins AT2G36910 30.337 4.61e-28 121