Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1105 ATGGACCCCGAAACTAGCTTTTTCCTCAAACCCATTTTCACACATGGGCTTTCCGGTTCACTACACCTGGTGTTGCTACTTGTGCTGGTTATATCATGGCTATGTCAGAAAGCCCAGGCAAGCCATGTAGAAAGTGCACGAAAAGGAGTCTCTAATGCTGGGATTGTGTTCTACAAACGGACTCTCTTCTGTAGTTTAGCTGTTTGTGTGTTTAATCTTGTGTTGTCCTTATTGAGCTACTTTTATTGGTACAAGAATGATACCTTAGAAGAGATTGTTATGCTTTCGAATTTTGCAATTGAAGCAGTTGCCTGGGGTGCCCTTTGTGTTTATTTGCGTTCTAGATTTTCCAATTCCGGGGAACAAAACTTGCCCTATTTCTTGAGAGTTTGGTGCTGGGTTTACTCCTTTCTTTCTTGTTTTTGCCTTGTCATAGACTTTGTACTCCATAGACAGCATCTTTTGCTTCCAATCATATACCTTGTTTCTGATGTCGGATCCTCTCTCACAGGTTTGTTTCTCTGTTATGTGGTATGCTCTGCTAAAAATGCAAAATGTACGCTTCTTGAAGAACCCCTTTTGAATGGTGATTCTAGCGTAAGCAACAATGCTGAGTCACATAAGAATACCCCATATTCAAAGGCTGGATTTTTCAATATTCTTACTTTCTCATGGATGAGTCCTTTAATTGCTATAGGAAATACGAAGACTTTAGACCTTGAGGACCTCCCTCCGCTTACTAGCGATGACAGTGCTTATGGGGCATTTCCCACTTTTAGAAAAAACCTTGAATCAGAGGGTACTCTTACCAGAGTGACCACTCTTACACTGGGGAAGGCATTAGTCTTCTCAACATGGAAAGGGATTCTTTTATCAGCTTTATTTGGATTCTTATTCACATGTGCTTCTTACATTGGCCCCTTTCTTATTGACATCTTTGTTCAATACCTCAATGGGCAGCAAAAGTTTAAAAATGAGGGTTATGTTTTGGCAATTGCATTTTTTGGTGCAAAGCTTGTCGAGTGCCTTTCACAGAGGCACTGGATGTTTAGATTCCAGCAAGTTGGGGTTAGAGTTCAATCAATGTTGGTGGCAAAGATCTACTCTAAAGGATTGACCCTATCATGTCAATCTAAGAAGAGTCGCGCAAGTGGGGAAATCATCAACTTAATGACTGTTGATGCTGCTAGAGTAGGTGAGTCTGTTTGGTACTTGCATGATCCATGGATGGCTGTTCTGCAAGTTACTCTGGCCTTGATTATTCTGTATAGAAGTGTTGGAATTGCTTCAATAGCTACTTTTCTTTCTTCTGTTCTTCTGATGTTGGCAAACTTGCCCTTGGGGTCAACGCAAGAGAAGTTCCAAGGCAAGTTTATGGAGTCAAAAGACACAAGAATGAAGGCCACTTCTGAGATTCTAAGGAACATGAGGATTCTAAAGTTGCAAGCATGGGAGATGAAGTTTCTTTCAAGGGTTATTGAGATTAGGAAGATTGAGACAGGATGGCTAAAGAAGTTTCTATTCAGTATAGGAATGACAAGATTCCTTTTCGCTTCTGCTCCAACTTTTATTGCTATGGTTACTTTTGGTGCTTGTATTCTCATAGGGATCCCACTTGATTCAGGGAAGATTTTATCTGCACTTGCAATATTCAGAATTCTTCAGCAGCCCATCTATAAACTACCTGATACAATCTCAATGATAGCACAAACTAAGGTTTCCCTTGACCGGATTTCATCATTCCTTTGCCTCGAAGACTTGCAATCTGATGTTATAGAGAAGCTTCCAAGGGGTAGTTCTGATACAGCAATTGAGATAGTTTATGGTAATTTCTCGTGGGATTTATCCTCATCTATTCCCACATTGCAAGATATAAATGTCAAAGTTGTCCATGGCTTCAGGGTTGCAATTTGTGGCACCGTTGGTTCAGGGAAGTCAAGTCTAATTTCTTGCATACTAGGAGAAGTAACAAAGCTCTCTGGGACACTAAAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCTCGTGCTCTGTACCAAGATGCTGATATATATCTGCTTGATGATCCTTTCAGTGCTGTGGATGCGCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTAGAATTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAAAATAACTCAATCAGGGAAGTACAATGACATCCTCAACTCAGGCACAGATTTTATGGAGCTTGTAGGTGCACACAGAGAAGCCCTCTCTGCAATTAATCAATTAGAGAGGAAACCCACCTCTAAAAAATTGAGTGTCACAGTGGATGACACGGATTCATTAAGTACATTTTCACTTGAGGAAAAAGTGGAAAACAAAGATGTTCAAAATGGTAAAAGAGATGATACAGTTGGACCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGTAAAGTTGGGTTTGAAGTCTACAGGAAATACATCACAACAGCATATGGAGGAGCTTTAGTTCCCCTCATATTACTCTTGCAAGTTCTTTATCAGGCTTTGCAAATTGGGAGCAATTATTGGATGGCGTGGGCAACTCCTGTATCAGCAACTGAGGACCCTCCTGTTCGAAGCTTTACACTTATGGTTGTCTATGTTGCTCTGGGAATTGGAAGTGCCTTGTGCAACCTTGTTAGAACAATGCTTGTTTTGATAGCTGGATACAAGACAGCCACAATACTCTTCAATAAGTTGCATTTGTGCTTCTTCCGAGCCCCCATGTCATTTTTTGATTCCACTCCAAGCGGGCGAATCCTAAATAGAGCTTCTACAGATCAAAGTGCCATAGATATGGACGTTCCACCTTTAGTAGCGGCAGTTAACATCTATGCTATTCAGCTTTTGGGAAATATTGCTGTGATATCTCAAGTTGCATGGCAGGTTTTTATAGTATTTATTCCTGTGATTGCAGCTTGCATTTGGTATCAGCAATACTACTCAGAATCAGCTCGAGAATTGTCACGATTGGTTGGTACATGCGAAGCTCCAGTCATACAACACTTTTCTGAAACCATTTCTGGATCAACAACCATTAGAAGTTTCGACCAAGAATCAAGATTTCAGGACACAAATAAGAAATTGATAGACAGATATTCCAAGCCCAAGTTATACACTACAACTGCAATGGAATGGCTGTGCTTTCGGTTGGATATGTTATCTTCTATCACATTTGCATTCAGTTTGGTTTTCTTGATATCTTTTCCAGATGCAATTAGCAATCCTGGTATTGCTGGCCTGGCTGTGACATATGGGCTTAATCTAAACACATTGCAAGCTGGATTAATTTGGTGTCTTTGTAATATGGAGAACAAAATTATATCAGTAGAAAGAATATTTCAGTACACTAACATCCCAAGTGAGCCTCCTCTTGTAATAGAAGAAAATGGACCAGATTCTTCTTGGCCATCAGCTGGAGAGGTTCATATCCAGGATTTGCAGGTTCGGTATGCTCTGCACTTGCCTCTAGTGTTGCGTGGTCTTACATGCACTTTCACTGCTGGAGGAAAAACAGGCATTGTGGGGAGAACCGGCAGTGGAAAATCAACTCTAGTACAAGCACTTTTCCGACTTGTTGAACCTTCTGCTGGTCGTATATTGATAGATAACATTGATATCTCTTTGATTGGACTTCATGATTTACGCTCCAGAATAAGCATTATTCCTCAGGATCCAGCAATGTTTCAAGGGACTTTAAGAAGTAATCTGGATCCACTAGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTTGATATGTGCCAACTTGGACATGAAGTAAGGAAGAAGGAAAGCAAGCTCGATTCCATGGTTACTGAGAATGGAGATAATTGGAGTATGGGTCAGAAGCAGCTGGTTTGCCTCGGTCGTGTTCTACTTAAGAAAAGCAAAATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAGCATTATTCAGCAAACCATCAGGCAACATTTTTTAGAATGTACAGTTATGACCATTGCGCACAGAATAACTTCTATCCTAGATAGTGATATGGTTCTAGTTCTAAGCCAAGGGCTAATTGAAGAATATGATTCGCCAAAAAGATTGCTTGAGAACAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACTCGCAGGTCGAAGTTGAGTTTCCAGAGTTGA 4263 0.4058 MDPETSFFLKPIFTHGLSGSLHLVLLLVLVISWLCQKAQASHVESARKGVSNAGIVFYKRTLFCSLAVCVFNLVLSLLSYFYWYKNDTLEEIVMLSNFAIEAVAWGALCVYLRSRFSNSGEQNLPYFLRVWCWVYSFLSCFCLVIDFVLHRQHLLLPIIYLVSDVGSSLTGLFLCYVVCSAKNAKCTLLEEPLLNGDSSVSNNAESHKNTPYSKAGFFNILTFSWMSPLIAIGNTKTLDLEDLPPLTSDDSAYGAFPTFRKNLESEGTLTRVTTLTLGKALVFSTWKGILLSALFGFLFTCASYIGPFLIDIFVQYLNGQQKFKNEGYVLAIAFFGAKLVECLSQRHWMFRFQQVGVRVQSMLVAKIYSKGLTLSCQSKKSRASGEIINLMTVDAARVGESVWYLHDPWMAVLQVTLALIILYRSVGIASIATFLSSVLLMLANLPLGSTQEKFQGKFMESKDTRMKATSEILRNMRILKLQAWEMKFLSRVIEIRKIETGWLKKFLFSIGMTRFLFASAPTFIAMVTFGACILIGIPLDSGKILSALAIFRILQQPIYKLPDTISMIAQTKVSLDRISSFLCLEDLQSDVIEKLPRGSSDTAIEIVYGNFSWDLSSSIPTLQDINVKVVHGFRVAICGTVGSGKSSLISCILGEVTKLSGTLKKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKITQSGKYNDILNSGTDFMELVGAHREALSAINQLERKPTSKKLSVTVDDTDSLSTFSLEEKVENKDVQNGKRDDTVGPKGQLVQEEEREKGKVGFEVYRKYITTAYGGALVPLILLLQVLYQALQIGSNYWMAWATPVSATEDPPVRSFTLMVVYVALGIGSALCNLVRTMLVLIAGYKTATILFNKLHLCFFRAPMSFFDSTPSGRILNRASTDQSAIDMDVPPLVAAVNIYAIQLLGNIAVISQVAWQVFIVFIPVIAACIWYQQYYSESARELSRLVGTCEAPVIQHFSETISGSTTIRSFDQESRFQDTNKKLIDRYSKPKLYTTTAMEWLCFRLDMLSSITFAFSLVFLISFPDAISNPGIAGLAVTYGLNLNTLQAGLIWCLCNMENKIISVERIFQYTNIPSEPPLVIEENGPDSSWPSAGEVHIQDLQVRYALHLPLVLRGLTCTFTAGGKTGIVGRTGSGKSTLVQALFRLVEPSAGRILIDNIDISLIGLHDLRSRISIIPQDPAMFQGTLRSNLDPLEEYTDEQIWEALDMCQLGHEVRKKESKLDSMVTENGDNWSMGQKQLVCLGRVLLKKSKILVLDEATASVDTATDSIIQQTIRQHFLECTVMTIAHRITSILDSDMVLVLSQGLIEEYDSPKRLLENKSSSLAQLVAEYTRRSKLSFQS 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1105 1420 FunFam ABC transporter C family member 5 819 1155 - -
Bisa10g1105 1420 Gene3D - 664 791 IPR027417 -
Bisa10g1105 1420 Gene3D - 586 663 IPR027417 -
Bisa10g1105 1420 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 290 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1105 1420 Pfam ABC transporter 665 696 IPR003439 GO:0005524
Bisa10g1105 1420 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1174 1408 IPR003439 GO:0005524
Bisa10g1105 1420 SMART AAA_5 631 744 IPR003593 GO:0016887
Bisa10g1105 1420 SMART AAA_5 1200 1385 IPR003593 GO:0016887
Bisa10g1105 1420 ProSitePatterns ABC transporters family signature. 669 683 IPR017871 GO:0005524|GO:0016887
Bisa10g1105 1420 Pfam ABC transporter transmembrane region 857 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1105 1420 Pfam ABC transporter transmembrane region 290 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1105 1420 Gene3D - 1158 1410 IPR027417 -
Bisa10g1105 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1166 1400 IPR027417 -
Bisa10g1105 1420 FunFam ABC transporter C family member 3 1157 1409 - -
Bisa10g1105 1420 Pfam ABC transporter 622 663 IPR003439 GO:0005524
Bisa10g1105 1420 Pfam ABC transporter 1192 1339 IPR003439 GO:0005524
Bisa10g1105 1420 SUPERFAMILY ABC transporter transmembrane region 284 583 IPR036640 GO:0005524|GO:0016020
Bisa10g1105 1420 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 473 767 IPR003439 GO:0005524
Bisa10g1105 1420 CDD ABC_6TM_ABCC_D1 291 578 IPR044746 GO:0140359
Bisa10g1105 1420 CDD ABC_6TM_ABCC_D2 855 1149 IPR044726 GO:0140359
Bisa10g1105 1420 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 857 1137 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g1105 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 758 IPR027417 -
Bisa10g1105 1420 CDD ABCC_MRP_domain2 1172 1392 - -
Bisa10g1105 1420 SUPERFAMILY ABC transporter transmembrane region 855 1156 IPR036640 GO:0005524|GO:0016020
Bisa10g1105 1420 Gene3D ABC transporter type 1, transmembrane domain 820 1155 IPR036640 GO:0005524|GO:0016020
Bisa10g1105 1420 Gene3D ABC transporter type 1, transmembrane domain 269 585 IPR036640 GO:0005524|GO:0016020
Bisa10g1105 1420 FunFam ABC transporter C family member 10 273 586 - -
Bisa10g1105 1420 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 665 1408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1105 Bisa-ChrBisa10 26982375 26992053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1105 664 790 Calmodulin-binding Proteins AT2G36910 31.579 2.70e-15 79.7