Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1089 ATGGATCGGGGGGACCACATGGCGTTACCTGGGTCTGCACCTTACTATATGCAGAGGGGAATAGCTGGTTCTGCAGCACAGCCTGAGCTACATGGTTCGCCAAATATTCGCCCGCTGTCTAACTCCAATCTACAATTTCAACCCAATATTGGAGGCGGTACCATTGGATCCACATTACCATTAGAATCTTCAGCAATCTCACCTCATGGTGTCAATGTGGGTGTTCCTTCTCGCATGCCATCTGGGGAACCTGTCAAGAGAAAGAGAGGAAGGCCTAGGAAATATGGGCCAGATGGAACTGTGTCATTGGCATTGACTCCATCATCAACTAGTCATCCAGGAAGTGGAACCGTAACACCAAGCAATAAGCGGGGTAGAGGGCGTCCTCCTGGGTCTGGCAAGAAACAACAGTTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGGATGGGTTTCACTCCTCATATCATCACCATTGCAATTGGAGAAGATATTGCGTCAAAAATAATGGCCTTTTCCCAGCAGGGGCCTAGAGCTGTATGCGTATTGTCAGCCAATGGTGCTGTCTCTAATGTGACTCTCCGTCAGCCTTCAACTTTGGGTGGTTCTGTCACATATGAGGGGCGTTATGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTAATGATAGTGGTGGCTCACGCAATCGTACTGGGGGACTAAGTGTCTCTCTTGCTAGTCCTGAGGGTAAAATCATAGGTGGAGGAGTTGGCGGAATGCTTATTGCAGCATGTCCTGTTCAGGTGATAGTTGGGAGCTTTCTATGGGGTGGATCAAAGTCCAAGAACAAGAAAAAGGAGGTCGAAGAAGTTGCCGTGGAGTCAGATCATCAGAATCATCAGCAGGCAGTTCATAATCCAATTGCAATGAATAACATATTGGCCAATCAAAATCTGACCCCAACATCTTCTATTGGTACTTGGCCCGCATCTCGTCAGATGGACATGCGTAATTCCCATGTTGACATTGATTTAATGCGGGGTTGA 1029 0.4762 MDRGDHMALPGSAPYYMQRGIAGSAAQPELHGSPNIRPLSNSNLQFQPNIGGGTIGSTLPLESSAISPHGVNVGVPSRMPSGEPVKRKRGRPRKYGPDGTVSLALTPSSTSHPGSGTVTPSNKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAIGEDIASKIMAFSQQGPRAVCVLSANGAVSNVTLRQPSTLGGSVTYEGRYEILCLSGSYLLNDSGGSRNRTGGLSVSLASPEGKIIGGGVGGMLIAACPVQVIVGSFLWGGSKSKNKKKEVEEVAVESDHQNHQQAVHNPIAMNNILANQNLTPTSSIGTWPASRQMDMRNSHVDIDLMRG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1089 342 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Bisa10g1089 342 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Bisa10g1089 342 Gene3D - 155 296 - -
Bisa10g1089 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 270 - -
Bisa10g1089 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 62 317 IPR039605 GO:0003680
Bisa10g1089 342 ProSiteProfiles PPC domain profile profile. 149 293 IPR005175 -
Bisa10g1089 342 FunFam AT-hook motif nuclear-localized protein 1-like 155 286 - -
Bisa10g1089 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 268 IPR005175 -
Bisa10g1089 342 MobiDBLite consensus disorder prediction 61 138 - -
Bisa10g1089 342 CDD DUF296 154 268 IPR005175 -
Bisa10g1089 342 MobiDBLite consensus disorder prediction 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1089 Bisa-ChrBisa10 26731304 26736771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1089 1 342 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 49.589 3.62e-88 267