Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1087 ATGGGGATTCAATGCTCCAGACTCTTGCCATGTTGCGTGAATTCACAAGTTAAGGCTTCTGTTCTTGAAGCTCCAGATGCTGAAAACGAGGATAGAAGTGAGGCTAATAACTGGCCTGCATTTCGTGAGTTTTCATTAGAGCAACTAAGGAATGCAACATCTGGTTTTGCTGTGGAGAATATTGTATCTGAACATGGAGAAAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGGTCGGCAGTTTATGGAGGAAGCAAGATCAGTTGGTCAGCTCCGCAACCAGCGATTGGCAAATTTGATTGGTTGTTGTTGCGAAGGTGATGAGAGGTTGCTTGTGGCAGAATATATGCCAAATGAAACACTAGCAAAACACCTTTTTCATTGGGAAACACAACCCATGAAATGGGCAATGCGGCTAAGAGTTGTTTTACATCTCGCACAAGCTCTAGAATACTGTACAAGCAAAGGGCGTGCCCTCTATCATGACCTCAATGCATATAGAGTTTTATTTGATGAGGATGGTAATCCTAGGCTTTCGAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCCCCAGAGTATCTGAGAACCGGGAGAGTAACACCAGAAAGTGTAATATACAGCTTTGGCACTCTTTTGCTGGATCTTCTTAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTGATTCGAGACAGAAACCTTCAGATGCTGACAGATTCTTGTTTAGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGCCTGGCATCTCGATGTTTGCAGTATGAACCTAGAGAGCGGCCAAATCCAAAGTCATTGGTGGCTGCTTTGACTCCTCTTCAGAAAGAAACAGAGGTTCCTTCACATATCTTGATTGGTATCCCACACAGTGATGCTGCTTTTGCTTCATTGTCCCCACTTGGTGAAGCATGCTCAAGAAAGGATTGGACTGCCATACATGAAGTTCTGGAAAATATCAGCTATAAAGATGATGAAGGCGTGACAAATGAGTTATCATTCCAGGTGTGGACTGATGAAATGCAGGAAACACTTAATAGTAAGAAAAAGGGGGATGTTGCTTTCCAGCAGAAGGATTTTAGACTTGCAACGGAGTGCTACACACAGTTCATCGATGGTGGAACAGTGGTTTCTCCGACTGTCTATGCACGGCGTAGTTTGTGTTATCTCATTGGTGACATGCCTCAAGAAGCACTGAATGATGCAATGCAAGCACAAGTCATATCTCCTATATGGCACATTGCGTCTTATCTTCAATATCTTGCCCTCTCTGGACTTGGGATGGAGACTGAAGCTCAAGTGGCACTTAAAGAGGGCACAACTTTGGAAGCCAAGAAGAACGAAACTTCCAGACAAAAGTGA 1479 0.4341 MGIQCSRLLPCCVNSQVKASVLEAPDAENEDRSEANNWPAFREFSLEQLRNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFMEEARSVGQLRNQRLANLIGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALTPLQKETEVPSHILIGIPHSDAAFASLSPLGEACSRKDWTAIHEVLENISYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRLATECYTQFIDGGTVVSPTVYARRSLCYLIGDMPQEALNDAMQAQVISPIWHIASYLQYLALSGLGMETEAQVALKEGTTLEAKKNETSRQK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1087 492 Gene3D Tetratricopeptide repeat domain 381 492 IPR011990 GO:0005515
Bisa10g1087 492 FunFam probable serine/threonine-protein kinase At4g35230 381 490 - -
Bisa10g1087 492 SUPERFAMILY TPR-like 385 488 IPR011990 GO:0005515
Bisa10g1087 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Bisa10g1087 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Bisa10g1087 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Bisa10g1087 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 18 486 IPR045845 GO:0004672|GO:0009742
Bisa10g1087 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Bisa10g1087 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Bisa10g1087 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1087 492 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1087 Bisa-ChrBisa10 26646994 26652157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1087 10 331 Glycoside Hydrolase AT3G07070 33.429 1.14e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa10g1087 PK_Tyr_Ser-Thr 3.6e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1087 10 26646994 26652157 Bisa10g1087 10 26646994 26652157 ECH