Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1065 ATGGCTGTGGTGAGTCCTGAGCCTGCAATTCCGCAAAGGTTTAATTCTGTGAGGTCCCTTCAAGATTTTGAAGTCACCAGAACCATGACTCGTAGGGGAGAAATTGTAGTGGAGGCTAACACAGGTGTGGTTAATGACACCATTTATGTCGCTGTGACAAAAGGTGTGAAAGAGAGCGAATCAAATCTGATATGGGCAGTACAGAACTCTGGAGGAAAGAAGATTTGCATCCTCCATGTACATGTGCCTGCAACAATGATCCCCTTGATGGGTACTAAGTTTCCAGCAAGTTCAGTGACAGAACAGGAAGTTGAAGCATTCAGGGAAATTGAAAGGCAAAAGATGCATAAGAATCTAAATGAGTATCTTCTCATCTGTCAACGAAAGGGGGTACGAGCAGAGAAACTGCATATTGAAATGGAATGCATTGAGAAAGGAATTTTGGAGCTTGTCTCCCAGTATGGTATCCATAAGCTTGTAATGGGAGCAGCATCTGATAAGTGTCATTCTAGGAGAATGATGGCCCCCAAATCTAAGAAAGCCATTTATGTTTGTAAACATGCTCCAGCTTATTGTCAAATACAGTTTGTCTGCAAAGGGCACCTTATACACACTAGGCATTGCAATTTGGATAATGGTAACATAGAGGTAAACCCTGAAGCTGTACATTCACTTCAGCTAAGGTCTCAATCTGTTACGATGGGGCAGAATGATCAGGTCAAACTTATTAAATCAGCTCTAGAGTTACTTCGCAGAGCAAGGTCTGCCAATGACGGGCATGGATGCAGTATGGTGACCTTTTCTACTCCAGGTGAAGGGTTTTCCACTCCAAGTAACAGGTTGGGCGGAGAAGTAAGTTCAGATGAGTCAGGTGGTCTTGATCTGTCAAGTCTGATTTCTGAGGGGAATGAGACTGGAATAAGCTCCAGTGAATTTTCTCCAGTTATTGCAGATCTTCATCAATTATCTCCTCCTAGTGTACTGCAGGATGGAGGAATGGACGATGCTCTTTATGATCTACTTGAACAGGCCATGGTTGAGGCTGAGAATGCTAGGCTGGATGCATATCAAGAAACAGTTAAACGTGGGAAAGCTGAAAAAGAAGCCGTTGATGCTATGCGCAAGGCTAAAGCCTCTGAAAGCTTGTATAAAGATGTCTTGAGACAACGGAAGGAGGCAGAGGAAGCACTAGAAAAAGAAAGAGAAGAACTTGAAAGGATGAAGAGTGAGCAAGAAAAAGTTAAGGAGGAACTTCGACTTGCCCTAGATCAAAAGTCGTTGCTCGAGAGTCAAATTGCATCATCCGACCTCATGGTAAAGGACTTGGAGCAGAAGATTGTATCTTCTGTGGATCTGTTAAAAAGTTTCGAGAAAGAAAGAGATGACTTGAAGATTCAGCGTGATAATTTATTGAGAGAAGCTGAGGAGTTGAAAAAACAAGGAGAGGCTTCAAGCACACGTGTGTATGAATTGTTTTCAGAATTCTCTTTTCAAGAGATTGAACAAGCAACAAATTACTTTGATTTATCACTGAAGATTGGAGAAGGTGGATATGGAAGTATATATAAAGGTATCCTGCGTCACACTGAAGTGGCTATAAAAATGTTGCACGCGGACAACACCTCGCAAGGACCCTCAGAGTATCAACAGGAGGTTACTGTATTGAGTAAGTTAAGGCATCCCAATCTTGTCGCATTAATAGGAGCCTGCCCAGAATCCTGGACTATTGTATATGAGTATCTACCAAATGGAAGCCTTGAAGATCGGCTTAGCTGCAAGGACAACACACCTCCATTATCATGGCAAACTAGAATCCGCATTGCTGCTGAGCTCCGCTCTGCTCTCATCTTTCTCCATTCCAGTAAACCTCACAGCGTAGTGCATGGAGACCTAAAACCCTCCAATATTCTCCTTGATGAAAACCTTGTGAGCAAGCTTAGCGACTTTGGAATATGTCGTATATTATCTAATCAGGAGAATTCAAGTGATAATACTACAGAATGTTGGAATACTGTCCCTAAGGGAACTTTAGTCTACATGGATCCTGAATTCCTTGGCTCAGGGGAACTCACTGCAAAATCAGATATTTATTCATTTGGAATCATATTATTAAGATTGTTGACGGGAAGACCAGCCTTGGGAATAACAAGGGAAGTGCAGTATGCATTAGACAAAGGAAAGTTGAAATCCCTCTTGGATCCTTTAGCAGGAGACTGGCCATTTGTGCAGGCTGAACAGTTAGCTCGTGTGGCTTTGAGGTGTTGTGAGATGAATAGCAAGAGCCGGCCAGATCTTTATTCAGACGTCTGGAAAATGCTGGAAGTGATGAGCACTTTTTCTGGAGGCACAAACTCATCCAAACTACGTTATGAAGGGCCTGACCAACCTCCTTTGTATTTTATTTGTCCAATCTCCCAGGAAGTCATGCGAGATCCGCATATTGCCGCAGATGGTTTCACTTATGAAGCTGAAGCTATACGAGGACGGCTGCATAGTGGTCACAACACTTCTCCGATGATCAGTGCAAAGCTTGAACATAGTGTTCTTGTACCAAACCATGCTCTTCGCTCTGCAATCCAGGACTGGCTTCAAAATCACTGA 2601 0.4295 MAVVSPEPAIPQRFNSVRSLQDFEVTRTMTRRGEIVVEANTGVVNDTIYVAVTKGVKESESNLIWAVQNSGGKKICILHVHVPATMIPLMGTKFPASSVTEQEVEAFREIERQKMHKNLNEYLLICQRKGVRAEKLHIEMECIEKGILELVSQYGIHKLVMGAASDKCHSRRMMAPKSKKAIYVCKHAPAYCQIQFVCKGHLIHTRHCNLDNGNIEVNPEAVHSLQLRSQSVTMGQNDQVKLIKSALELLRRARSANDGHGCSMVTFSTPGEGFSTPSNRLGGEVSSDESGGLDLSSLISEGNETGISSSEFSPVIADLHQLSPPSVLQDGGMDDALYDLLEQAMVEAENARLDAYQETVKRGKAEKEAVDAMRKAKASESLYKDVLRQRKEAEEALEKEREELERMKSEQEKVKEELRLALDQKSLLESQIASSDLMVKDLEQKIVSSVDLLKSFEKERDDLKIQRDNLLREAEELKKQGEASSTRVYELFSEFSFQEIEQATNYFDLSLKIGEGGYGSIYKGILRHTEVAIKMLHADNTSQGPSEYQQEVTVLSKLRHPNLVALIGACPESWTIVYEYLPNGSLEDRLSCKDNTPPLSWQTRIRIAAELRSALIFLHSSKPHSVVHGDLKPSNILLDENLVSKLSDFGICRILSNQENSSDNTTECWNTVPKGTLVYMDPEFLGSGELTAKSDIYSFGIILLRLLTGRPALGITREVQYALDKGKLKSLLDPLAGDWPFVQAEQLARVALRCCEMNSKSRPDLYSDVWKMLEVMSTFSGGTNSSKLRYEGPDQPPLYFICPISQEVMRDPHIAADGFTYEAEAIRGRLHSGHNTSPMISAKLEHSVLVPNHALRSAIQDWLQNH 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1065 866 SUPERFAMILY Protein kinase-like (PK-like) 485 776 IPR011009 -
Bisa10g1065 866 Gene3D Phosphorylase Kinase; domain 1 477 580 - -
Bisa10g1065 866 Gene3D HUPs 46 194 IPR014729 -
Bisa10g1065 866 Pfam U-box domain 797 866 IPR003613 GO:0004842|GO:0016567
Bisa10g1065 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bisa10g1065 866 SMART serkin_6 507 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1065 866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 794 866 IPR013083 -
Bisa10g1065 866 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 180 - -
Bisa10g1065 866 PANTHER OS02G0152300 PROTEIN 48 861 - -
Bisa10g1065 866 Pfam Protein kinase domain 511 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1065 866 CDD RING-Ubox_WDSUB1-like 797 852 - -
Bisa10g1065 866 ProSiteProfiles Protein kinase domain profile. 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1065 866 SMART Ubox_2 799 862 IPR003613 GO:0004842|GO:0016567
Bisa10g1065 866 FunFam receptor-like protein kinase FERONIA 471 580 - -
Bisa10g1065 866 Coils Coil 338 366 - -
Bisa10g1065 866 ProSiteProfiles U-box domain profile. 795 866 IPR003613 GO:0004842|GO:0016567
Bisa10g1065 866 Gene3D Transferase(Phosphotransferase) domain 1 581 787 - -
Bisa10g1065 866 ProSitePatterns Protein kinases ATP-binding region signature. 513 534 IPR017441 GO:0005524
Bisa10g1065 866 CDD STK_N 47 200 - -
Bisa10g1065 866 Coils Coil 376 431 - -
Bisa10g1065 866 Coils Coil 439 487 - -
Bisa10g1065 866 SUPERFAMILY RING/U-box 793 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1065 Bisa-ChrBisa10 26166386 26172024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1065 1 866 U-box Gene Family AT2G45910 52.529 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa10g1065 Pkinase 3.7e-44 CL0016