Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1048 ATGCTTGGTAATGGGAAATCAGTGGATTTGTATAAGCTCTTCATGGTTGTCAAGGAGAAAGGTGGGTATGATGCAGTCTCCAAAAACCGTTTGTGGGATCTGGTGGGGGAACAGTCTGGGTTGGGTATAAGCATTGGTTCATCTGTGCGACTGATTTACACTAAGTACTTGAGTACTTTGGAGATATGGTTAAAAGAAGTTGCTGACAGTAAGGTCGCTGACTGCAGTCTGGAGTTTAATAGAGTTGATTTTGGTAAGCATTTGATGGAGTTGCGTGCAGAAGTTGAAGGGCTGTCGGATTGTACTGATGAAGAGATGGGAGATGAATTATGTCGTCGTTCTGAGTTAATCACTGAAGATAAACACTCTGGGGAAGGAAAGGGCTTGGCTGCAGAGTCTGGAGGGGCCAAAAAATTTCAGAATGGAGGATTTATTGATTTGAATATGCCAGACCCTGAGATGAATGAATCTACTAACAATGAGCCAAACAAAATGCCTGGATTATCAGATGGAGGCAAGAGATGTGACAATGACGATGATGATGTTTTGATATTGGATCCGTCTGGTGTTGATAGTGAGAAATTTGGTCGTAAGAGGAAGAGACAGTCTATGTGGGGAATGCTAAGCTGGATGACTGGCGTTGCAAAGAATCCTTGTGATCCTGTCGTTGGTTCAATACCTGAAAAATCAAAGTGGAGGTCTCACAATAATGAGGAGATCTGGAAACAGGTTTTGTTGTTTCGGGAAGCAGTTTTTTTTAAAAGACATGTTGAGTCAAGCAGTGAACAACTGAATTGGCAGAATCAGAAGATGCATCCATGCATGTATGATGATCAACTTGGGACAACTTACAATTTTAGAGAGAGGTTGAAGAGTGACAAGAAGCTTTTATTTGGAAAATCTGCATCTACTGTAAGAGTCTCTTCCGATTCAACCTTAGAAACCCAGGGAAATTTGGAGAGAACTTCAAGTTCTCACACTGAAGATTCTGCTGAGAAAAAATCGCTTGATTCCTCTACTGCACCATCGGGTCTTGACAAATGTAGCACAGTGCCCATCCCTCTAGGGCCAAATCATCAAGCTGAAGTACCAGAGTGGACTGGCAAAACTTCTGAAAGTGATCCGAAGTGGTTGGGGTCCCTCATATGGCCTTCAAAGAAGGTGAATCAGAGACTTCTCATCGAGAGGGACCCCATGGGCAAGGGAAGACAAGACTTATGTGGTTGCCAAGTACCGGGTTCTGTTGAGTGTGTTAGATTTCATGTTGCTGAGAAGAGGTCTAAGCTTAAACTGGAATTGGGTGTGGCTTTTAATCAGTGGAATTTAGATAAGGTAGGTGAAGAAGTTGGGCTGTCGTGGACAGTGGAAGAAGAGAAGAAGTTCAAGGACGTGGTGCGATCAAACCCTCCATCACTTGAGAGATATTATTGGGATCATATATTTAGATCATTTCCGAAGAAGACTAGGGAAGATTTAGTTAGCTACTATTTTAATGTCTTTCTTTTGCAGCGCAGAGGACATCAAAATAGGCATACACCAGATGAAGTTGACAGTGATGATGATGAATCGGAATTTGGACCATTGAGGAATGTTTTTGGACAGCAAGCACAGAAGCCAACTAGCTCCATCTTACTAACCCCCAAAAAATCACAGACAAAGAACAAATAG 1668 0.4239 MLGNGKSVDLYKLFMVVKEKGGYDAVSKNRLWDLVGEQSGLGISIGSSVRLIYTKYLSTLEIWLKEVADSKVADCSLEFNRVDFGKHLMELRAEVEGLSDCTDEEMGDELCRRSELITEDKHSGEGKGLAAESGGAKKFQNGGFIDLNMPDPEMNESTNNEPNKMPGLSDGGKRCDNDDDDVLILDPSGVDSEKFGRKRKRQSMWGMLSWMTGVAKNPCDPVVGSIPEKSKWRSHNNEEIWKQVLLFREAVFFKRHVESSSEQLNWQNQKMHPCMYDDQLGTTYNFRERLKSDKKLLFGKSASTVRVSSDSTLETQGNLERTSSSHTEDSAEKKSLDSSTAPSGLDKCSTVPIPLGPNHQAEVPEWTGKTSESDPKWLGSLIWPSKKVNQRLLIERDPMGKGRQDLCGCQVPGSVECVRFHVAEKRSKLKLELGVAFNQWNLDKVGEEVGLSWTVEEEKKFKDVVRSNPPSLERYYWDHIFRSFPKKTREDLVSYYFNVFLLQRRGHQNRHTPDEVDSDDDESEFGPLRNVFGQQAQKPTSSILLTPKKSQTKNK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1048 555 Pfam ARID/BRIGHT DNA binding domain 4 61 IPR001606 GO:0003677
Bisa10g1048 555 MobiDBLite consensus disorder prediction 533 555 - -
Bisa10g1048 555 CDD SANT 452 500 IPR001005 -
Bisa10g1048 555 MobiDBLite consensus disorder prediction 309 324 - -
Bisa10g1048 555 MobiDBLite consensus disorder prediction 309 373 - -
Bisa10g1048 555 CDD ARID 4 61 - -
Bisa10g1048 555 SMART ELM2_2 353 404 IPR000949 -
Bisa10g1048 555 Pfam Myb-like DNA-binding domain 452 499 IPR001005 -
Bisa10g1048 555 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 552 - -
Bisa10g1048 555 SMART bright_3 2 66 IPR001606 GO:0003677
Bisa10g1048 555 MobiDBLite consensus disorder prediction 152 171 - -
Bisa10g1048 555 MobiDBLite consensus disorder prediction 508 555 - -
Bisa10g1048 555 SUPERFAMILY ARID-like 4 73 IPR036431 GO:0003677
Bisa10g1048 555 Gene3D - 1 75 IPR036431 GO:0003677
Bisa10g1048 555 SMART ARID_2 1 61 - -
Bisa10g1048 555 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1048 Bisa-ChrBisa10 25693163 25698033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bisa10g1048 ARID 5.9e-09 CL0123