Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1046 ATGTCACTCCTCACAACTCTCTCTTCCTTCGTCACAATATCCATCGCTTCCCTCTTTCTATCTGTTTTCCTTTCACAATTCCAACCAAACCAAGCCATTCCTTCTTCTAACACCAATTTTTCGCTACCCATTTTCTCAAATTTCACTCCCATTACAGAAGGAATAGCTTTGAGCAGAGGGAGGAAGCTGGAATCGAAACCTGTGATAATAATAAGAGGAAACGAGAGGATTTCCAGCAAGAATCAGGCATTCGAGCTTGGTTTCTTCAACATCAGTGGCGAAGAACCCAACTGGTACTTGGGAATCTGGTATGCATCGGTTTCGAGTCCAAAATACGTCTGGGTCGCGAATCGCGAGAAACCCAGTAAGAATCTCGCCGAATCGACCTTGGAGATCACAGAAACCGGTCTTTTAGCCGTGAAAGATTCAGTGAATTCGGTTCTCTGGCAAAGCACGAACACTGAAACTTCAACACCAGAGGAGATAAAGCTTCTGGAAAACGGGAACTTGGTTCTGCTCACTCGCGACGGCTCTGTTTCATGGCAGAGCTTCGATTTTCCGACGGACACATGGTTACCAGGCATGAATCTGACCCGGAACCGATCCTTGGTGTCGTGGCGGAGCCCCATGGACCCGTCTCCGGGATTCTATTCTCTGCGGCTGAGGCCACCGGGCTACGGTGAGTTCGAGCTTGTTTTCAATGACTCCAAATCTTATTGGACCACCGGAAACTGGACCGGCGAACAGTTCCTTAACGTGCCGGAGATGACGATTCCATACATCTATCACTTCCACTTCGACGACCCGTTCACTCCAACGGCGTCGTTTGGGTTCTCCGAGAAGCCTCTGGATAACGGGTTGAGACAGCCCACGCTGTTCCGGGTCGAACCGATCGGGCAGATAAAACAGTACACGTGGTGGTCTCAGACCGGAAGCTGGAACATGTTCTGGTCGCGGCCGGAGGATGTGTGTAAGGTTTATCGTCTCTGTGGGAGCTTCGGAGTCTGCACTGGTCAAACGTCGAAGCCCTGCGACTGCGTCTCCGGTTTCGAACCGTTCGACAACGGTAAATGGGCTTCCGGCGACTATTCTGGCGGGTGCCGTAGGAAAAGTGATAAAATCTGCGATAAAAGCGACGGGTTCGAAGATCTGGGCGTTATGAGCTTCGACGGAGCCAATGCTCAGGCGTTTCAAACCAAGTCACGTAGCGATTGCGAGGCTAGTTGTTTGAATTCTTGCGATTGCATTGGCTTATCTTTCAACGAAAGGTCTGGTTCCTGCAACAACTTTTACGGATCAATTCTGAATCTCCAAAATTCGTCTTCTGATACTTCTCTTCAGGACGATTTGTTTGTTAGGGTACAAAGAGGAGAATCTGTTAAGAAACTCAGTCGTCAAATTTTAACTGGTATAATTATTGGTTCAATTGCATTTCTGGGATTTATAATAGCGACATTGTTAATTTTACTGAATCGTAGACAGAAGAAAAAATTGGAAGAAGATGGGTTGATCCCTGTTCAGAATCTACGGTTATTTTCCTACAAAGAGCTTCAAGTAGCGACTCGAGGGTTCTCAGAGAAGGTCGGGCATGGCGGTTTCGGCACAGTATTTCAAGGAGAATTACCAGATTCTACTCTCGTTGCCGTGAAACGGTTAGAGAGACCAGGTGGTGGAGAGAAAGAGTTCAGAGCAGAAGTTTCCACAATTGGGAATATCCAACACGTCAATCTCGTGAGACTAAGAGGGTTTTGCTCAGAAAATTCTCACAGACTTCTGGTTTACGAGTTCATGCCAAACGGTGCTCTTAGCTCTTACCTCCGCAAAGAAGGAGGAGGGCCTAGCTTGAGCTGGGAGGTTCGGTTCCGAATCGCTATTGGAACAGCAAAAGGCATAGCTTATTTACACGAAGAGTGCAGAGATTGCATCATTCACTGTGATATCAAACCCGAGAACATCCTCTTGGGCAGCGATTTCACTGCCAAAGTATCAGATTTCGGCTTAGCGAAGCTAATGGGGAGAGACTTCAGTAGGGTTTTGGCAACCATGAGAGGCACTTGGGGGTATGTAGCTCCAGAGTGGATTTCTGGTGTGGCAATCACCACAAAAGCTGATGTTTACAGCTACGGTATGACATTGCTAGAACTGATCGGTGGTCGCCGGAACGTGGAGGCCCCACCGCCGTCCCCTGGTGGACGAGAGAGTGGCGAGGTCGGTGAGAAAGAGAAATGGTTCTTTCCTCCATGGGCAGCACAGAGGATAATTGAAGGGAACTGGACTGCAATAATTGACAAGAGGCTTGGAAATGCATATGACATGGAGGAGGCAAGGAGGGTGGCTATGGTGGCTGTGTGGTGCATTCAGGATGATGAAGAAGGTAGGCCTACAATGGGGATGGTAGTGAAGATGTTGGAGGGGTTAGTGGAAGTGAGTGTCCCTCCAACGCCTAATTTGCTTCAGGCATTGGTCTCCGGCGAGTCCTTTCGCGGGGTCAAGGTGGATTCCGGCACCGGGGGCAGCTTCTCTGGCGGCAATGGTGGTTCAGAATCGTTCACAGGGGGTGTTTCTTCCCCTGCAAATGTGAACCTCAATGTTGTTGTGCGATGA 2604 0.4889 MSLLTTLSSFVTISIASLFLSVFLSQFQPNQAIPSSNTNFSLPIFSNFTPITEGIALSRGRKLESKPVIIIRGNERISSKNQAFELGFFNISGEEPNWYLGIWYASVSSPKYVWVANREKPSKNLAESTLEITETGLLAVKDSVNSVLWQSTNTETSTPEEIKLLENGNLVLLTRDGSVSWQSFDFPTDTWLPGMNLTRNRSLVSWRSPMDPSPGFYSLRLRPPGYGEFELVFNDSKSYWTTGNWTGEQFLNVPEMTIPYIYHFHFDDPFTPTASFGFSEKPLDNGLRQPTLFRVEPIGQIKQYTWWSQTGSWNMFWSRPEDVCKVYRLCGSFGVCTGQTSKPCDCVSGFEPFDNGKWASGDYSGGCRRKSDKICDKSDGFEDLGVMSFDGANAQAFQTKSRSDCEASCLNSCDCIGLSFNERSGSCNNFYGSILNLQNSSSDTSLQDDLFVRVQRGESVKKLSRQILTGIIIGSIAFLGFIIATLLILLNRRQKKKLEEDGLIPVQNLRLFSYKELQVATRGFSEKVGHGGFGTVFQGELPDSTLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMPNGALSSYLRKEGGGPSLSWEVRFRIAIGTAKGIAYLHEECRDCIIHCDIKPENILLGSDFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPPSPGGRESGEVGEKEKWFFPPWAAQRIIEGNWTAIIDKRLGNAYDMEEARRVAMVAVWCIQDDEEGRPTMGMVVKMLEGLVEVSVPPTPNLLQALVSGESFRGVKVDSGTGGSFSGGNGGSESFTGGVSSPANVNLNVVVR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1046 867 CDD B_lectin 70 187 IPR001480 -
Bisa10g1046 867 PIRSF SRK 39 853 IPR024171 GO:0004674
Bisa10g1046 867 FunFam Receptor-like protein kinase 4 487 596 - -
Bisa10g1046 867 ProSiteProfiles Bulb-type lectin domain profile. 62 185 IPR001480 -
Bisa10g1046 867 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Bisa10g1046 867 Pfam D-mannose binding lectin 112 202 IPR001480 -
Bisa10g1046 867 SMART serkin_6 522 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1046 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 245 IPR036426 -
Bisa10g1046 867 Pfam S-locus glycoprotein domain 240 352 IPR000858 GO:0048544
Bisa10g1046 867 SMART blect_4 68 187 IPR001480 -
Bisa10g1046 867 Gene3D - 66 184 IPR036426 -
Bisa10g1046 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Bisa10g1046 867 SUPERFAMILY Protein kinase-like (PK-like) 505 804 IPR011009 -
Bisa10g1046 867 ProSiteProfiles Protein kinase domain profile. 522 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1046 867 CDD PAN_AP_plant 375 454 - -
Bisa10g1046 867 FunFam S-receptor-like kinase 5 597 812 - -
Bisa10g1046 867 ProSiteProfiles PAN/Apple domain profile. 375 455 IPR003609 -
Bisa10g1046 867 Gene3D Transferase(Phosphotransferase) domain 1 597 811 - -
Bisa10g1046 867 PANTHER OS07G0415500 PROTEIN 14 816 - -
Bisa10g1046 867 CDD STKc_IRAK 528 806 - -
Bisa10g1046 867 Pfam Protein kinase domain 525 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1046 867 Gene3D Phosphorylase Kinase; domain 1 487 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1046 Bisa-ChrBisa10 25658630 25661233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1046 512 813 Receptor kinase-like Gene Family AT5G20050 46.326 2.65e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa10g1046 Pkinase 1.2e-43 CL0016