Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1043 ATGAAAAGCCCAATTCCGTACTCTCGCCGCCGGAAATCCAGCTCCGGCCATCGGAGTACGCCGGACCGCCTCGCCTACTCTTCCAGCTATGCCTCTCCGGAGGTCAACGCTACCTTCGGGAAGTCAAAATCCGGTCAGAACCCCGTGGCGGCTGCCGCCAGATCAGTTGTTGCGATTTTCGTTGGTTGCTTCACTCCACCGGAGACTAGTAACTCGAAGAGCTTCGTGGAATCTGAGGAGTCCAAAGCTCCAAACTCAGGTGTGTCAGATGCTTCTAGTAGTCGGAGAACGGGTCTCTCAAATCGAGGTACCATTATCAGTTCATACAAGTCAACCCAGGCTAAAGAGCCTGGATCTGTGAACTTCACCCTGGAGGATATCTTGCAAGCCACAAAAAATTTCTCCCCTACTTTTAAGATTGGCCAGGGTGGTTTTGGGACAGTCTATAAAGCAAAACTTCAGAATGGAACTGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAGCATTCGGGTATTGAGTTCCAAAGTGAGATCCAAACATTATCAAGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGGTATTTGGAAGAAGGAGAGGAAAGAATTATTGTTGTGGAGTATGTTCCAAATGGAACCGTTAGAGATCATTTAGATTGCAATCGTGGCAACATTTTGGATTTTGCTGCTCGGTTAGACATTGCAATTGATGTGGCACATGCTGTCACCTATCTTCACATGTATATAGATCATCCCATCATTCATAGAGACATAAAATCTTCCAACATCCTTCTCACTGAAAATTTTCGAGCTAAGGTAGCTGACTTTGGTTTTGCCAGACAGGCACCAGACAGTGATTCTGGTGTGACCCATGTATCCACCCAAGTTAAAGGAACTGCAGGCTACTTGGATCCTGAATACCTGAAATCTTATCAACTAACTGAAAAGAGTGATGTTTATTCTTTTGGCGTTTTGCTTGTTGAACTTGTCACAGGAAGACGTCCCATTGAAGCAAAATTTGAACTCAGGGAGCGAATAACTGCAAAATGGGCTATGAAGAAATTTATTGAGGGTGATGCCATCTCGGTCTTGGACCCAAGACTAGATAAGACTGCTGCAAATAATCTGGCCCTCGAAAGGATACTTGAACTAGCTTTGCAGTGTTTGGCCCCTCGTAGACAAAGCAGACCTAGTATGAAGAGATGCGCTGAGATCCTTTGGGCCATCCGCAAGGATTACAGAGAGCTTTCAGCTTCAGACTTTCGTTCATATTCCTCTACTTCCCATAGGAGTGCATCAATAAAAGAGTGA 1320 0.45 MKSPIPYSRRRKSSSGHRSTPDRLAYSSSYASPEVNATFGKSKSGQNPVAAAARSVVAIFVGCFTPPETSNSKSFVESEESKAPNSGVSDASSSRRTGLSNRGTIISSYKSTQAKEPGSVNFTLEDILQATKNFSPTFKIGQGGFGTVYKAKLQNGTVVAVKRAKKSLYEKHSGIEFQSEIQTLSRVEHLNLVKFYGYLEEGEERIIVVEYVPNGTVRDHLDCNRGNILDFAARLDIAIDVAHAVTYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGVTHVSTQVKGTAGYLDPEYLKSYQLTEKSDVYSFGVLLVELVTGRRPIEAKFELRERITAKWAMKKFIEGDAISVLDPRLDKTAANNLALERILELALQCLAPRRQSRPSMKRCAEILWAIRKDYRELSASDFRSYSSTSHRSASIKE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1043 439 MobiDBLite consensus disorder prediction 69 100 - -
Bisa10g1043 439 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Bisa10g1043 439 PANTHER OS01G0750732 PROTEIN 40 424 - -
Bisa10g1043 439 MobiDBLite consensus disorder prediction 1 28 - -
Bisa10g1043 439 Gene3D Phosphorylase Kinase; domain 1 97 211 - -
Bisa10g1043 439 Pfam Protein kinase domain 139 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1043 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 92 211 - -
Bisa10g1043 439 MobiDBLite consensus disorder prediction 1 16 - -
Bisa10g1043 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Bisa10g1043 439 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1043 439 SUPERFAMILY Protein kinase-like (PK-like) 115 412 IPR011009 -
Bisa10g1043 439 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1043 439 Gene3D Transferase(Phosphotransferase) domain 1 212 433 - -
Bisa10g1043 439 CDD STKc_IRAK 140 409 - -
Bisa10g1043 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1043 Bisa-ChrBisa10 25608559 25611513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1043 118 402 Receptor kinase-like Gene Family AT1G79620 46.021 6.64e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bisa10g1043 Pkinase 5e-52 CL0016