Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1037 ATGGGCTTCCCGGTCGGATACTCCGAGGTCGTCTTCCCGAACTTCTTCCTCCATACGCTTTCCGTCCTCGGATTCATCCGAAACCTCATTTTCCTGCTCTTCCACTTCCTCGGACTCTCCGATTTCCTCGAGACCGAAGTTGTCTGGTCCGAATCTCACCCCCGATTACCGGACAACCCGCCGGTGTCGGCGCTGCTGATCCGTGAATTCCTTCCGGTCATCAAATTCGGCGAGCTCCTGCGCTCCGGTGCCGGCGACGCGCAGGAGAGCTGTGCCGTTTGCCTGTACGAGTTCCAGGGGGAGGACGAAATCAGGTGCTTGACGAACTGCAAGCACATTTTCCACCGGGCGTGTCTCGACCGTTGGATGGATCACGATCAGAAAACGTGTCCGCTTTGTAGGAACCCCTTCGTGCCTGATGATATGCAGGATGATTTCAATCAACGGCTCTGGGCTGCTTCTGGAGTTCCTGATTTTTACGGAGATTTCACTTCGGTTTGA 501 0.5549 MGFPVGYSEVVFPNFFLHTLSVLGFIRNLIFLLFHFLGLSDFLETEVVWSESHPRLPDNPPVSALLIREFLPVIKFGELLRSGAGDAQESCAVCLYEFQGEDEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRNPFVPDDMQDDFNQRLWAASGVPDFYGDFTSV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1037 166 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Bisa10g1037 166 SUPERFAMILY RING/U-box 90 140 - -
Bisa10g1037 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 142 IPR013083 -
Bisa10g1037 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 21 153 - -
Bisa10g1037 166 Pfam Ring finger domain 90 134 IPR001841 -
Bisa10g1037 166 SMART ring_2 91 133 IPR001841 -
Bisa10g1037 166 FunFam RING-H2 finger protein ATL73 67 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1037 Bisa-ChrBisa10 25450397 25450897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1037 1 156 C3H Transcription Factor Family AT1G63840 53.125 3.37e-54 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1037 10 25450397 25450897 Bisa10g1037 10 25450397 25450897 ECH