Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1018 ATGTCAGTATACGACGCCACTTTTGTCGACAGCGCCCTCTCAAAGCGCACCTCAATCTTCGGCCTCCGGCTCTGGGTCGTCATCGGAATCCTCGTCGGCTCCGCCATCGTCCTCGCCCTCTTCCTACTCTCCCTCTGCCTTACCTCCCGCCGCCACCGCCGCCGCCGCCGCGCAGTCGGTCAAAAGATTTCCGACCGAAAACAGGCCGGAAGCCCTGTTATATTGAAGGAAATCCAGGAGATCGTGCACCTGCCGGGGCCGAACCAGCACCACCGTCCGCCGGCGCCGGCGCCGGAGATCCACGTGGACATAGGAAAATCGGAGCACCGAGTCACGGTGTTCTCCGATCGGATTTCTAGCGGGGAAAGCAGGGGTACGGCTGCGAGTGCCTGCGAAACGACGTCGTCTTTTGGGAGTGGGAGTATTGGGCCCGATGTTTCGCATCTGGGGTGGGGAAGATGGTACACTCTGAGAGAGCTTGAGGCTGCGACTAATGGCTTCTGTGAAGAGAACGTGGTCGGAGAAGGTGGCTATGGAATTGTGTACAGAGGAGCACTCAGTGATGGAACCAGAGTTGCAGTCAAAAACCTTCTGAATAACAAGGGCCAAGCTGAGAAAGAATTCAAAGTGGAGGTAGAAGCAATCGGTCGTGTGCGGCACAAGAACCTCGTTAGGCTACTCGGATACTGTGTTGAAGGAGCACACAGGATGCTTGTGTACGAGTACGTGAACAATGGCAATCTAGAACAGTGGCTTCACGGGGATGTTGGAGAGATAAGCCCTTTGACATGGGAGATCCGTATGAACATCATATTGGGAACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCGAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTCGATCGCCAATGGAACCCCAAAGTCTCTGATTTCGGGCTTGCTAAGCTCTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTGATGGGCACTTTTGGTTATGTTGCACCGGAGTATGCCTGCACGGGAATGCTGACCGAGAAGAGTGATATTTACAGCCTTGGAATTATGATCATGGAGATAATTTCTGGGAGGAGCCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTGATTGATTGGTTGAAAACTATGGTCGGAAATCGAAAATCCGAGCAAGTAGTCGATCCTAAGCTCCCTGAGATGCCATCTTCAAAGGCTCTCAAACGCGCTCTACTGGTTGCTCTTCGATGTGTCGATCCCGATGCAACAAAAAGGCCTAAAATGGGGCATGTCATCCACATGCTTGAGGCAGATGACCTGCTATTCCGAGATGAACGTCGGATCGAAGGAGAATCCTCCCGGTCCCATCGCGATTGTCACCGACAAGAGCAAAAGGAATCAAATTTAGATAGAAGACAAATAGGTGGAGGAGGGGTCACTGGTCAAAGTGAAGATGATGATAGTAGTAGAAATCACCATCAGCCTACTAGGTGGAGATGA 1509 0.5149 MSVYDATFVDSALSKRTSIFGLRLWVVIGILVGSAIVLALFLLSLCLTSRRHRRRRRAVGQKISDRKQAGSPVILKEIQEIVHLPGPNQHHRPPAPAPEIHVDIGKSEHRVTVFSDRISSGESRGTAASACETTSSFGSGSIGPDVSHLGWGRWYTLRELEAATNGFCEENVVGEGGYGIVYRGALSDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDVGEISPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSLGIMIMEIISGRSPVDYSRPQGEVNLIDWLKTMVGNRKSEQVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIEGESSRSHRDCHRQEQKESNLDRRQIGGGGVTGQSEDDDSSRNHHQPTRWR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1018 502 MobiDBLite consensus disorder prediction 488 502 - -
Bisa10g1018 502 SMART serkin_6 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1018 502 Gene3D Transferase(Phosphotransferase) domain 1 243 452 - -
Bisa10g1018 502 FunFam Probable serine/threonine-protein kinase At1g01540 147 242 - -
Bisa10g1018 502 MobiDBLite consensus disorder prediction 452 502 - -
Bisa10g1018 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Bisa10g1018 502 CDD STKc_IRAK 173 439 - -
Bisa10g1018 502 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
Bisa10g1018 502 MobiDBLite consensus disorder prediction 452 473 - -
Bisa10g1018 502 SUPERFAMILY Protein kinase-like (PK-like) 145 439 IPR011009 -
Bisa10g1018 502 Pfam Protein kinase domain 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1018 502 PANTHER OS01G0323000 PROTEIN 7 465 - -
Bisa10g1018 502 ProSiteProfiles Protein kinase domain profile. 167 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g1018 502 FunFam Putative receptor-like serine/threonine-protein kinase 243 453 - -
Bisa10g1018 502 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1018 Bisa-ChrBisa10 24878925 24882264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g1018 139 489 Receptor kinase-like Gene Family AT4G02010 42.297 8.99e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bisa10g1018 Pkinase 1.8e-47 CL0016