Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1015 ATGGTGTCTGGGAACTCGAATCCAGCTCAAGGCTTTTACTACTTCGATCCCATGAATATGGGTCTCCCCGGTCTCAACCACCCTCCGCCGCCTCCGGCTTCATCGGCGACAGAAACTGCTGCCGGCGGCGATACGGCGTCGTATGCGGATGATCCGAATAAGAAGATCCGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGTCGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTGTTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTCGGGTCAAAAACAGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGAACAAGTGAACACGTACCTCCTCCCCGGCCGAAGAGAAAAGCGGCTCACCCGTACCCTCAAAAAGCTCCTAAAACTGCTCCATCAGTATCCCAAGTTACTGGGCCGTTGCAATCGTCAAATGCTTTCGTGGAACCTGTGTACATTTATAGGCCAGATTCTTTATCCGTGCTTGGAACACCAGTTACTAGTGTACCTTTGTCTTCCTGGAGTTATAATGCTATGCCACCTGTCAGCATGCCACAAGTGACTAAAGATGACACGGAATTGGCTCGACAATCTGTTCCTCTCAATTGTTGCTATAGCAGTAGTAATGACAGCACTCTTGGGGCTCGGCCAGATAGCAAAGTTTCAGATCAAGTGGACCAGGGGAAGCCAATAAACGTAATGCCGGATTTTGCACAAGTCTACAGGTTTATTGGTAGCGTGTTTGATCCAAATGCAGCCAATCACCTACAGAGACTGAAAAAAATGGACCCTATAAATGTGGAAACGGTATTGTTGTTGATGAGAAATTTATCCATCAATTTAATGAGTCCTAAGTTTGAGGATCATAGGAGGTTGCTTTCATCGTATGATGTTGACTCTGAGAAGGCGAAGGGTAGTAGTGTTTGCAGTGATCCCCTGACCGACAAATCTGAAAGTGCTGTTCTGTCTGCTTAG 1014 0.4665 MVSGNSNPAQGFYYFDPMNMGLPGLNHPPPPPASSATETAAGGDTASYADDPNKKIRKPYTITKSRESWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKTAPSVSQVTGPLQSSNAFVEPVYIYRPDSLSVLGTPVTSVPLSSWSYNAMPPVSMPQVTKDDTELARQSVPLNCCYSSSNDSTLGARPDSKVSDQVDQGKPINVMPDFAQVYRFIGSVFDPNAANHLQRLKKMDPINVETVLLLMRNLSINLMSPKFEDHRRLLSSYDVDSEKAKGSSVCSDPLTDKSESAVLSA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1015 337 MobiDBLite consensus disorder prediction 323 337 - -
Bisa10g1015 337 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bisa10g1015 337 CDD SANT 68 111 IPR001005 -
Bisa10g1015 337 SMART sant 65 113 IPR001005 -
Bisa10g1015 337 MobiDBLite consensus disorder prediction 23 54 - -
Bisa10g1015 337 MobiDBLite consensus disorder prediction 116 152 - -
Bisa10g1015 337 Gene3D - 69 116 - -
Bisa10g1015 337 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa10g1015 337 ProSiteProfiles SANT domain profile. 64 117 IPR017884 -
Bisa10g1015 337 SUPERFAMILY Homeodomain-like 60 116 IPR009057 -
Bisa10g1015 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bisa10g1015 337 MobiDBLite consensus disorder prediction 219 240 - -
Bisa10g1015 337 MobiDBLite consensus disorder prediction 312 337 - -
Bisa10g1015 337 FunFam protein REVEILLE 6 isoform X1 68 116 - -
Bisa10g1015 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 64 113 IPR006447 GO:0003677
Bisa10g1015 337 PANTHER SWI/SNF COMPLEX-RELATED 36 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1015 Bisa-ChrBisa10 24770427 24774352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa10g1015 Myb_DNA-binding 7.4e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1015 10 24770427 24774352 Bisa10g1015 10 24770427 24774352 ECH