Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0996 ATGGGCGACCATGGATGGGACTTTGCTGGAACCATTTGCTCAATCTGCTACGAAGATCTCAAGCCCATTGTTGAAGACCTCCAATCCATCACTATCTGCGGCCATGTCTTCCACGAGCTCTGTTTGCAGCAGTGGTTCGAGTATTGTTCAAAAGCAAAGAAGTGCACCTGCCCTGTGTGCAAGCAGAATTGTAGAGCAAGTGACGCGGCTCGCCTTTATTTCCAGTCGGTTGGAGACGTGAAAGATGCTGTTCTTCCTGAGAAACCCATTGTGTGTGAGGGGAAAGATGCAGCGGTGTTGCGTAGAGAAGTGAAAAGATTGGAGGTGAAAGTTTCAGGGCTCGGTTCAGTATTGGAGCGGCAGGAGAAGGAATTGGGAGATCTTACTGAGGAGCTTCGCACTTGGAAGGAGCAGGCAAAATTGGATGCAGGACTAAAAAATGAAGCCTTGAAACAAAAAGCATTCATACAACAACAGTTTCTTATGAAATCAGAGGAGCTTGAAAAGTCAACTTTGGAGTGTTTGAGATTACAAGATAGAAATATGGCCTTGGCCAAAGAACTTGCATCATTCAAATTAGTGTCGGATCTGAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGGACCAACGGTAAAGATACAATAGACACATTGAGAAGATCTTTGGTCATGCGGAACAGGAGTTACAAAGAATTAATGGCTAAGTGCAATATTCTGGGAAGAGGTGAGGCCCGTTATGGTAAAAAGCTTGAGAAGGCAAAAGAGAAAGTCAAGAAACTGAAGGCAAGGCTACAAGAACTGGAGACAGCTGCTGAAGTAAAAGAGAATGAAATGCTAAGGTCTCTGAAAGTTTCAAAGAATACAAATTGCTTAAAGAATCTTGAAAGCTATAACAATTATAATTCTGATCTGTTGTCAGCTGGTAAAGTTTCATCAGAAGAGCATGGGAAACAATTTTTGACGCCCCATTCTAGAATGGATCTGCCTGTGACCAATAGTAAATTGTCAGAACCTGCAAAGTTAGGGAATTTAAATGGTAAAGGAAGTAAAGAAAATAAAGATGTGAATTTCAGTAAAGGAAGCATTACCGGGATGTCTTTTAACAGGGAAAAAAATTACATCTCAATTGATGAAGATGATTCTGAATTTACCAAAGCTATGCCCGGACTTGCAAAATACAACTGTAAAGTTCAAGACAGTGATACTCTTACTCTTAAGAAGCCCACTCTAGCAAAGTCAGAAGCAGCTTCTGGTGCAAAGAGAGAAACAGTAATACAACGAGAAAATAACTTGGCTGAGCCCTTGAGAATTGATGTTGACGATGAATTGGGTAAACATGCTGCTGGTACTATGGATCAAGATGTGACATTACTAGATAATATGAAACAAGTTCAACCCACGATTAACATTCGAAAAGAAAATCCATCAACATTATCACTTTCCAATCCAGGTGATTTTTGTTTCTCTGGTGGGTTACTTGGTCCTGATGGAACTAATCGGTACTTGGGTAAATGGTGCAAGCGAGGACAGAACAAGGAATCAGCAGCTCCCAAAGGTACAACTAATGGTAATTTGATAGCTGTTGGAGCTGATGGTAGAGGTGGCAGAGTTAAAGTTCTGAGATCTCCAAACCAAACCTTGCAGGATTTTAAGGAGAACACAGTAGGTTCAAAAAGGATGAAATTCGGACCTAAAGTAAATAGTGCACAGTCCCAGGGGTGCCTGCAGATAGAACACTTCTTTGGGAGGGTCACTCACTAA 1776 0.4155 MGDHGWDFAGTICSICYEDLKPIVEDLQSITICGHVFHELCLQQWFEYCSKAKKCTCPVCKQNCRASDAARLYFQSVGDVKDAVLPEKPIVCEGKDAAVLRREVKRLEVKVSGLGSVLERQEKELGDLTEELRTWKEQAKLDAGLKNEALKQKAFIQQQFLMKSEELEKSTLECLRLQDRNMALAKELASFKLVSDLNLDEDEVLKLATLGNGTNGKDTIDTLRRSLVMRNRSYKELMAKCNILGRGEARYGKKLEKAKEKVKKLKARLQELETAAEVKENEMLRSLKVSKNTNCLKNLESYNNYNSDLLSAGKVSSEEHGKQFLTPHSRMDLPVTNSKLSEPAKLGNLNGKGSKENKDVNFSKGSITGMSFNREKNYISIDEDDSEFTKAMPGLAKYNCKVQDSDTLTLKKPTLAKSEAASGAKRETVIQRENNLAEPLRIDVDDELGKHAAGTMDQDVTLLDNMKQVQPTINIRKENPSTLSLSNPGDFCFSGGLLGPDGTNRYLGKWCKRGQNKESAAPKGTTNGNLIAVGADGRGGRVKVLRSPNQTLQDFKENTVGSKRMKFGPKVNSAQSQGCLQIEHFFGRVTH 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0996 591 MobiDBLite consensus disorder prediction 340 362 - -
Bisa10g0996 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 178 IPR013083 -
Bisa10g0996 591 Coils Coil 104 138 - -
Bisa10g0996 591 CDD RING-H2 13 61 - -
Bisa10g0996 591 SMART ring_2 13 60 IPR001841 -
Bisa10g0996 591 SUPERFAMILY RING/U-box 11 65 - -
Bisa10g0996 591 Coils Coil 248 282 - -
Bisa10g0996 591 ProSiteProfiles Zinc finger RING-type profile. 13 61 IPR001841 -
Bisa10g0996 591 PANTHER RING ZINC FINGER PROTEIN-RELATED 7 589 - -
Bisa10g0996 591 Pfam Ring finger domain 12 61 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0996 442 589 C3H Transcription Factor Family AT4G01270 38.462 3.78e-21 95.1