Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0978 ATGTCCCCCTCCTCCTCCCCCACCGCCGCCTCCGCCGCCGTCACCTTCCTCTCCAGCGTCGGCCTCGGCTACTCCATCGCCATCGCCCTCGGCTTCCTCGTCCTCCTCTCCACACTCATCCTCTCTTCCTACCTCTGCTGCCGCTCCAGCTCTCGACCTGACCCGAACGCCACTCCGGACAACCATCCCGATGGGATTGTCCTGCCCCGCATAATCTTCGTGGCCGAGGACGAGCGAGATGAAAACGGCGTCGTGTTGGGCCTGGGCCAGCACGTTATTAATTCCTACCCGAGGTTTCAGTACACCAAGGTCGATAGCGATGGCGGCCGCGGGAATAGCACTACGTGCTCGATCTGCTTGTGCGAGTACAGGGAGGCAGAGATGCTGAGAATGATGCCGGAGTGTCGCCATTACTTCCACATGTCCTGCCTCGATGCGTGGCTGAAGCTGAACGGATCGTGTCCGGTGTGCCGGAACTCCCCGCTTCCGACGCCGCTGTCGACGCCGTTGCAGGAGGTGGTGCCTCTCTCTCTCAGTACGCCGATGATCGGAGACGGAGGAACTGACTTCAATTCCTTTTAA 582 0.6082 MSPSSSPTAASAAVTFLSSVGLGYSIAIALGFLVLLSTLILSSYLCCRSSSRPDPNATPDNHPDGIVLPRIIFVAEDERDENGVVLGLGQHVINSYPRFQYTKVDSDGGRGNSTTCSICLCEYREAEMLRMMPECRHYFHMSCLDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSLSTPMIGDGGTDFNSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0978 193 Pfam Ring finger domain 115 158 IPR001841 -
Bisa10g0978 193 PANTHER RING-H2 FINGER PROTEIN ATL67 5 177 IPR044289 GO:0016567|GO:0016740
Bisa10g0978 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 162 IPR013083 -
Bisa10g0978 193 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Bisa10g0978 193 SUPERFAMILY RING/U-box 92 163 - -
Bisa10g0978 193 SMART ring_2 116 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0978 Bisa-ChrBisa10 23861925 23862506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0978 1 179 C3H Transcription Factor Family AT5G07040 44.134 6.89e-38 126