Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0962 ATGTTGGACTATGAATGGGGGAACCCGTCCACTATAATGCTCACCGGAAACGAAGAAGCAGCTGCAGCCGCCGCTGCAGATTCCGAGCAAACCCACCGGCAAATCTTTGACCACTATGCTTCTCATGCCTTTCTAACCGACCACCTCATTTCTCAACAGCCACCGGGGCACACACTCACCGCCGCCGCTGATTTCTCTCTTCACCACTTTAATCCGCAACCCCACCCTAACCACCACCATAATATCCACCACACCCTCTTCGACCCACGCGCCTTTCCCGGCGCGTCATCCTCCCCCTTCCCTCCACCACCACTCCCGCCTCAGTCCATGTTCTCCCTTGACCCGCTACCTCCGGTCAACGCCAGCAACTGCGGGCCTGGTGGGCTTTTGGTGGTGCCCAAGTCCGAGGATGTCGGTCGGCCCATGGACTTCGCGGCATCTCGGATCGGGCTCAACCTGGGAGGGCGCACGTACTTCTCTTCCTCCGAGGACGACTTCGTGAGCCGCCTCTACCGCCGGTCCAGGCCAGGGGAACCCGGCTCGACGACGTCGTCTAACACTAACTCGCCGAGGTGCCAAGCCGAGGGATGCAATGCGGATCTCTCCCATGCGAAGCACTACCACCGCCGCCACAAGGTCTGCGAGTTTCACTCCAAGGCCGCCACGGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGCAGCAGGTTCCATCTTCTTTCGGAATTTGATAACGGAAAACGTAGCTGCAGGAAGAGACTGGCGGATCATAACCGTCGCAGAAGAAAAACTCAGCAGCCAGCTCTAGAAACCCAGAAATCTCAGCTCGAAAATGCCCGCAATTCTACTTTGGACAGTGTTGCAAGGTCCCCACCGGATTCTGGAGCTCAGTCATCCTCATCGGTGACGGTGGCGGTATCGCCGCCAGACTATTTCCGGCAAAGGCCATATCAAAGTACAAGTTCTTCAGCAACATCAAACTCACTGTTTTTCTCAACTGGGTAG 1011 0.5727 MLDYEWGNPSTIMLTGNEEAAAAAAADSEQTHRQIFDHYASHAFLTDHLISQQPPGHTLTAAADFSLHHFNPQPHPNHHHNIHHTLFDPRAFPGASSSPFPPPPLPPQSMFSLDPLPPVNASNCGPGGLLVVPKSEDVGRPMDFAASRIGLNLGGRTYFSSSEDDFVSRLYRRSRPGEPGSTTSSNTNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPALETQKSQLENARNSTLDSVARSPPDSGAQSSSSVTVAVSPPDYFRQRPYQSTSSSATSNSLFFSTG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0962 336 MobiDBLite consensus disorder prediction 256 336 - -
Bisa10g0962 336 MobiDBLite consensus disorder prediction 172 192 - -
Bisa10g0962 336 ProSiteProfiles Zinc finger SBP-type profile. 189 266 IPR004333 GO:0003677
Bisa10g0962 336 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 32 326 IPR044817 GO:0003677
Bisa10g0962 336 SUPERFAMILY SBT domain 190 270 IPR036893 GO:0003677|GO:0005634
Bisa10g0962 336 MobiDBLite consensus disorder prediction 76 103 - -
Bisa10g0962 336 FunFam Squamosa promoter-binding-like protein 14 183 253 - -
Bisa10g0962 336 MobiDBLite consensus disorder prediction 270 336 - -
Bisa10g0962 336 MobiDBLite consensus disorder prediction 177 192 - -
Bisa10g0962 336 Gene3D - 182 253 IPR036893 GO:0003677|GO:0005634
Bisa10g0962 336 Pfam SBP domain 192 265 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0962 Bisa-ChrBisa10 23323383 23325396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0962 1 239 SBP-box Gene Family AT1G02065 47.638 1.30e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa10g0962 SBP 9.6e-31 No_clan