Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0961 ATGTTCTGTTTGAACAACGGAAACAGAGAGCAAAACGGCAACAGTAACAATAGTACCAGTTTCGGTTGGGATTTATGGGAACCCACTTCTTCTTCCAATTCTACCCTCATCAACACGTTCTACACGGCCGACACCTCCACCGCCGTAGCCCCCACTCGCCACGAAGCGAGTCTCGCCAACGCGCTCATGTTTCTCCCTCAGGCCACGACCGCCGCTGATCGCGACCACCACGAGCGGCGGCCGCCACCGCTGGATGGGTCCCACGCGCACCTGGATCCGAACCTCGTCTGCTTGAAGCTGGGGAAGAGGCATTATTTTGAGGACGCTAATGCACCCCTTAGTGGTGGTGCTGTTTTGGTGGGAAAGAGAGGGAGAGGGAGAGGGTACCATGGAGGAGGCGAAGGTGGCGGTGGCGTGACGACGGCGGCGACGGTGCCGAGGTGTCAGGTGGAGGGTTGCCACGTGGCGCTCTTGAACGCGAAGGACTACCACCGGAGGCACAAAGTGTGTGAGATGCATTCCAAGGCACCTAAGGTTGTGGTTTTAGGGTTGGAGCAGAGATTCTGTCAGCAATGTAGCAGGTTTCATGTGGTGTCGGAGTTCGATGATTCGAAGAGGAGTTGTAGGAGGAGATTGGCTGGCCACAATGAGCGAAGAAGAAAGAGCTTCCACGAATCTGTGGCTAGGAATTCCTCCCAAGAAAAAAGATTTATGGTTGGAGGGTTTCCATACTTGTCGTCACCGCCGCCGCCGCCATCGTCAGGGTGTGTTCTCTCTCTTCTGTCATCCTGTAAGAATGACCATCCTTGGCTTTCTCCGGCCGATCTCTCCACAAGATGCAGCGCTGCCTTACGAGAACTCATAGCCGAAAACCGAGCTGCAATTATGTCCAAGCAGATCATTTTAGATAGAGACTGGCACCACCACCACCACGACCATCACCACCACGCCGCGGTGGTAGAAGACGATGGCATTAATAAGGAGGTCCATTCTCAATCCAATTATAGTTTCCCACAACACCACCAAATGTTTCCCTAG 1038 0.5414 MFCLNNGNREQNGNSNNSTSFGWDLWEPTSSSNSTLINTFYTADTSTAVAPTRHEASLANALMFLPQATTAADRDHHERRPPPLDGSHAHLDPNLVCLKLGKRHYFEDANAPLSGGAVLVGKRGRGRGYHGGGEGGGGVTTAATVPRCQVEGCHVALLNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSFHESVARNSSQEKRFMVGGFPYLSSPPPPPSSGCVLSLLSSCKNDHPWLSPADLSTRCSAALRELIAENRAAIMSKQIILDRDWHHHHHDHHHHAAVVEDDGINKEVHSQSNYSFPQHHQMFP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0961 345 MobiDBLite consensus disorder prediction 1 20 - -
Bisa10g0961 345 Gene3D - 139 209 IPR036893 GO:0003677|GO:0005634
Bisa10g0961 345 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 66 228 IPR044817 GO:0003677
Bisa10g0961 345 MobiDBLite consensus disorder prediction 212 231 - -
Bisa10g0961 345 Pfam SBP domain 148 221 IPR004333 GO:0003677
Bisa10g0961 345 ProSiteProfiles Zinc finger SBP-type profile. 145 222 IPR004333 GO:0003677
Bisa10g0961 345 FunFam Squamosa promoter-binding-like protein 14 139 209 - -
Bisa10g0961 345 SUPERFAMILY SBT domain 146 226 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0961 Bisa-ChrBisa10 23256408 23259762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0961 96 221 SBP-box Gene Family AT1G27370 50.365 3.85e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa10g0961 SBP 1.1e-31 No_clan