Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0957 ATGGTGTACTGTGATCACTGTAGAAGAAATGTTTCTGGAATGCGACCGGATGAAAGTTCCTTATGTTGTGAATACTGCGGGAAGGTTTTGGAAGATTTGTATATTTCTCAAGAGGCAACTTTTGTAAAGGATTCAGCTGGACAGAGCAAATTGTCTGGCCATTTTGTAAGAACAATTCAAAGCGAGTACTCTGCTTCACGCCAAAGAACTTTAGATAGAGCACTTGACGATATAAGATATCTAAGTTTTAGCCTTGGAGTGGAGGATACTAGTTTGGTTACACAAGCATTGGCCTTCTATAAAATAGCAGTTGAACGGAATTTCACAAGGGGACGTAAATCAGAGCAAGTACAGGCTGCTTGTCTCTACATCGCATTCCGGGAAAATAATAAGCCATACCTTCTCATTGATTTTTCAAATTACTTAAGGACGAATGTTTATGTGCTAGGTGCAGTTTTTTTACAGCTTTGCAAAGTATTAAGGCTTGAAGAGCATCCTATTGTTCAAAAACCCGTTGATCCTAGTCTTTTTATTTTTAAATATACAAATAATTTATTAAAGCAAAGGAATATGGTTGTCACTGAAACTGCACTGAGCATTGTTGCTAGCATGAAACGTGATTGGATGCAGACAGGGAGAAAACCTAGTGGCTTATGTGGTGCAGCACTGTACATAGCTGCTCTTGCACACGGTTTTAAGTGCTCTAAGTCAGACATTCTAAGAATTGTCCATGTATGTGAAGCAACATTGACCAAGCGTTTGGTGGAGTTTGAGAATACAGACTCTGCAAGCTTGACAGTTGACGAGTTGAATATGATGGCGAAAGAGCGTGAAAAAACTCCAATCGAAAAGCCAAATTGTCTATCAGAGGAAACTACTTCAAAGGATCTACTGTGTGAACACAAGGATAGAGGTGTGCCCCATTATGCCCATGGATTATGCGAAACATGTTATAAGGATTTTGTTAAACTCTCTGGAGGTCTTGATGGTGGTTTGGATCCTCCAGCATTCCAGCGTGCTGAGAGGGAGAGAATGACAGAATCACTTTCTGAGGAAAGTGGCAACCAATCAAGTGATTTGGCAAAAGCATCAGATGGTGCATGTGCAAGCCAAAAAGAACTACATGCTTCTGGGTCTGAAAGCATTGGGGCTGATGTTGAGCATACAGCTACTAAAGATGGTGGTTGTGATAAATCACATAGAGAGGATGATATGAATGCAAAAATTCATGATGAATCAGAAAGTCTATCTGATATCGATGATTTGGAGGTTGATGGCTATCTTCACAGTGAGGAGGAGAAGCATTACAAGACTATTATATGGACTGAAATGAATCGGGAGTATCTTGAGGAGCAAGCAGCCAAGGAAGCAGCCGCTGCTGCTGCTAAGGAAGCTTTTGAGGCAAATTTTCAGAACTGTTCTGAGGATATGCTAGCAGCAAAAGAGCTTGCTGAATCTGCTGCTGCAGCTGTTGCAAAATCCAGAAAGGAAAGGAAGCAGAGACGTGCCCAAGAGGCAAAGAATTCAGGTCCTGCTCAATCTGCTGCGGAGGCTACTCGCAAAATGTTGATTAATAAGAGGCTCAGCTCCAAAGTCAATCTTGACCGCTTGGACAATTTGTTTGATGATACTGAGGCTCCGGAGAACACTAAGAAAGTACGATTTGAACTGCATTCTGATAAACATGGCAAGGTAGAGCCTGAGGTAGAGGACAAAAGCAAATATGATGATATGGGATCAGTTGATGAATTTGAAGGCGGTGATATGGGCGAAGAAAGTAATTTGTATGATGAAAATTTGGTCGAGACATATGACTACGAAGATGATGATTATGGCTATGATGGTTTCTGA 1851 0.4111 MVYCDHCRRNVSGMRPDESSLCCEYCGKVLEDLYISQEATFVKDSAGQSKLSGHFVRTIQSEYSASRQRTLDRALDDIRYLSFSLGVEDTSLVTQALAFYKIAVERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRTNVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIFKYTNNLLKQRNMVVTETALSIVASMKRDWMQTGRKPSGLCGAALYIAALAHGFKCSKSDILRIVHVCEATLTKRLVEFENTDSASLTVDELNMMAKEREKTPIEKPNCLSEETTSKDLLCEHKDRGVPHYAHGLCETCYKDFVKLSGGLDGGLDPPAFQRAERERMTESLSEESGNQSSDLAKASDGACASQKELHASGSESIGADVEHTATKDGGCDKSHREDDMNAKIHDESESLSDIDDLEVDGYLHSEEEKHYKTIIWTEMNREYLEEQAAKEAAAAAAKEAFEANFQNCSEDMLAAKELAESAAAAVAKSRKERKQRRAQEAKNSGPAQSAAEATRKMLINKRLSSKVNLDRLDNLFDDTEAPENTKKVRFELHSDKHGKVEPEVEDKSKYDDMGSVDEFEGGDMGEESNLYDENLVETYDYEDDDYGYDGF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0957 616 MobiDBLite consensus disorder prediction 557 616 - -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 557 581 - -
Bisa10g0957 616 FunFam Transcription factor IIIB 90 kDa subunit 63 166 - -
Bisa10g0957 616 Pfam Brf1-like TBP-binding domain 417 542 IPR011665 -
Bisa10g0957 616 CDD CYCLIN_TFIIIB90_rpt2 170 260 - -
Bisa10g0957 616 SUPERFAMILY Cyclin-like 75 163 IPR036915 -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 491 505 - -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 601 616 - -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 491 517 - -
Bisa10g0957 616 Gene3D - 63 165 - -
Bisa10g0957 616 FunFam Cyclin/Brf1-like TBP-binding protein 409 459 - -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 341 402 - -
Bisa10g0957 616 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Bisa10g0957 616 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Bisa10g0957 616 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Bisa10g0957 616 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 532 IPR000812 GO:0006352|GO:0070897
Bisa10g0957 616 Coils Coil 489 509 - -
Bisa10g0957 616 Gene3D - 173 264 - -
Bisa10g0957 616 SMART cyclin_7 176 259 IPR013763 -
Bisa10g0957 616 SMART cyclin_7 76 158 IPR013763 -
Bisa10g0957 616 FunFam Transcription factor IIIB subunit 173 262 - -
Bisa10g0957 616 Gene3D Single helix bin 408 459 - -
Bisa10g0957 616 Pfam Transcription factor TFIIB repeat 69 157 IPR013150 GO:0017025
Bisa10g0957 616 Pfam Transcription factor TFIIB repeat 170 259 IPR013150 GO:0017025
Bisa10g0957 616 MobiDBLite consensus disorder prediction 350 364 - -
Bisa10g0957 616 MobiDBLite consensus disorder prediction 386 402 - -
Bisa10g0957 616 SUPERFAMILY Cyclin-like 172 266 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0957 Bisa-ChrBisa10 22900810 22928234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0957 1 523 Inorganic Solute Cotransporters AT2G01280 41.450 2.36e-114 348