Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0955 ATGAACCAGTGCGTTCCTAGCTGCGATGTCGATGAAAATCCCACACCCTCCTCATTCCCTCTTCGGTCATCCTCCGATTCCGGCGCTATTGATGATCGCATGTTAGACTATGAAGTTGCTAAGCTGACATGGGAGAATAGGCAGTTATGGATCCACGGGCTGGGCTGGCCGCGAGTGGCGGCGAAAGTCATCTCTTCGGCCACATGGGAGAAGCCTCGAGCCAGTGGGACCTTGGAGTCCATAGTGAACCAAGCCACGCGCTTGCCCCGCCGCACCAAGCCCGTGTCCGACGGAGACGACTTAGTGCCGTGGTTCGACCCGCCGAGAGCGGCGCCGTCTAACACGATGACCATGGACGCCATGGTGCCATGCTCCCACTACACCGACGAACAGCAGAGCGCGAAGATTATGGACTCTGTGCCCCGAGGGGGTGTGCTGGGCACGTGCATGGCGTGTTGCTCCACACGCGTGGAGTCTTGTAGTGGGTCCCATATGCACACGCAACAGCAGGAGGACGAGGCCCACTTGTCCGGGAAACGCGCGAGGGTAGCGCGTGAGTGGAGCAGCAAGGACCACAGCGTTAGTGGTAGCACGACGTTTGGAAGAGATAGCCAGCACGTGACGGTCGACACGTGCGACAGGGAATTGGGCGTGGCCTTTACTTCCGCTTCCACGGATTCGCCGGAAAACACCAGCTCCGCCAAGAAGGGCACCAAAACTACCACGACCGACGACCACGATTCTACCGATAAAGCTTCAATGCTGGATGAGGTGATAGAGTATCTTAAGCAGTTGCAAGCACAAGTGCAAATGATGAATAGAATGAACATGTCTTCCATGATGCTGCCAATGGCCATGCAACAACACCTTCGGATGTCTATGATGCCTCCAATGGGCATGGGTATGGGCATGGGTATGGGTTTGGACTTGAACGCCGTCGGCCATGCTAACATGGCCGGAATCCCTCCGGTCCTTCATCCTTCTGCCTTCATGCCTATGACCTCATGGGACGCTTCCACCAGCAATGATCAACTACAAGGGGCACTCGCGGCCATGTTGATGTCAAACCCCTTGTCCACATTTCTAGCATCCCAGTCACAACCTATGACCATTGATGCATACAGTAGGATGGTCGCAATGTATCAGCAACAACTTCAACCTCCAGCTTCTAATTCCAAGAGCTAA 1185 0.5536 MNQCVPSCDVDENPTPSSFPLRSSSDSGAIDDRMLDYEVAKLTWENRQLWIHGLGWPRVAAKVISSATWEKPRASGTLESIVNQATRLPRRTKPVSDGDDLVPWFDPPRAAPSNTMTMDAMVPCSHYTDEQQSAKIMDSVPRGGVLGTCMACCSTRVESCSGSHMHTQQQEDEAHLSGKRARVAREWSSKDHSVSGSTTFGRDSQHVTVDTCDRELGVAFTSASTDSPENTSSAKKGTKTTTTDDHDSTDKASMLDEVIEYLKQLQAQVQMMNRMNMSSMMLPMAMQQHLRMSMMPPMGMGMGMGMGLDLNAVGHANMAGIPPVLHPSAFMPMTSWDASTSNDQLQGALAAMLMSNPLSTFLASQSQPMTIDAYSRMVAMYQQQLQPPASNSKS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0955 394 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 249 393 IPR031066 -
Bisa10g0955 394 MobiDBLite consensus disorder prediction 190 204 - -
Bisa10g0955 394 MobiDBLite consensus disorder prediction 168 189 - -
Bisa10g0955 394 MobiDBLite consensus disorder prediction 220 250 - -
Bisa10g0955 394 Coils Coil 255 275 - -
Bisa10g0955 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 246 285 IPR036638 GO:0046983
Bisa10g0955 394 MobiDBLite consensus disorder prediction 220 238 - -
Bisa10g0955 394 Gene3D - 214 290 IPR036638 GO:0046983
Bisa10g0955 394 MobiDBLite consensus disorder prediction 1 25 - -
Bisa10g0955 394 MobiDBLite consensus disorder prediction 164 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0955 Bisa-ChrBisa10 22845286 22850634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0955 1 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 40.541 3.22e-56 187