Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0953 ATGATACCGCGTCGCTTGCTAATATCACTTTTAACTGTTTCCTTTCTTATTGCCCCTTATGTTTCTGGCAACTCTTTGAGTGACATCAAATCTTGGTGTAGCCAAACCCCTAACCCTCAGCCATGTGAGTATGGCCTTATGACCAATAAAGCCGTTAATAACAAACCCATCAAGAATAGGTCTGATTTTCTCAAGGCTTCGATAGAACTTGCCCTTGAAAAAACCCAAAATGGAGAAGCCACCACTCTTTCATTGGGTCCCAAATGTCGGAACCCACGTGAGAAAGCCGCATGGACTGATTGCCTTGACCTCTATGAGCACACCATCCTCAAGCTCAGCAAAACCCTAGACCCTTACTGCACCCAAGTTGACACTCAGACGTGGCTCAGCACAGCCCTAACCAACCTCGAAACTTGCAAAACCGGGTTCCAGGAGCTCGATGCCGGGGACTATATGTGGTCCTTAATTTCCAGCAATAATGTTACCGAGTTGCTAAGCAACAGCTTGGCTCTTAGCTGCAAGACTCCGTCCAATAAGGAGGAAGAAGAACAATCTTTTAAAGATGGGTTTCCGGCGTGGGTTAAGCCCGGTGATCGGAAGCTGTTGCAGTCTTCTTCTCCGGCTTCCCAGGCTAATGTAGTGGTGGCCAATGACGGGTCTGGCAAGTTCACGACGGTGAAGGCCGCCGTGAGTGCTGCACCGTCGAGTAGTAGCAGTAGGTATGTGATCTACGTGAAGGCAGGAGTGTATAATGAACAAGTTGAGATAACGAAAAAAAATATAATGCTTGTGGGAGATGGTACAGGCAAGACAATTATTACTGGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACTGTCGCTGCCGTTGGAGATGGGTTTATTGCTAGAGACATCACATTTAGGAACACTGCAGGAGCGTCAAATCATCAAGCTGTGGCATTTCGTTCAGGGTCAGATCTATCAGTGTTTTATAGATGCGGATTTGAAGGTTATCAAGACACACTGTATGTCCATTCGGAGAGACAATTCTATAGAGAATGTGACATTTACGGCACAGTTGACTTTATCTTTGGTAACGCTGCAGTTGTTCTACAAAATTGTAATATTTACGCAAGAAACCCTCCCCAGAAAACCATCACAGTCACGGCTCAAGGCCGAACCGATCCGAACCAAAACACCGGAATCATCATCCACAACTCCAAAGTCACGGCGGCCTCCGGTCTAAACCCGAGCTCAGTCAAGGCGTATCTCGGCCGGCCGTGGCAAAAGTACTCGAGGACAGTTTTCATGAAGACGTATCTTGATAGTTTGATTAATTCTGCTGGTTGGATGGCATGGAGTGGTAATTTTGCCCTAGACACATTGTATTATGCTGAGTATGCAAACACAGGCCCTGGTTCTTCCACTGCAAATAGGGTTAAATGGAAGGGTTACCATGTGCTTGCAAGTGCTTCTCAAGCCTCGCAATTCACTGTTGCAAACTTCATTGCTGGAAACTCGTGGTTACCAGCCACAAATGTGCCTTTCACCTCTGGTCTTTAA 1557 0.4676 MIPRRLLISLLTVSFLIAPYVSGNSLSDIKSWCSQTPNPQPCEYGLMTNKAVNNKPIKNRSDFLKASIELALEKTQNGEATTLSLGPKCRNPREKAAWTDCLDLYEHTILKLSKTLDPYCTQVDTQTWLSTALTNLETCKTGFQELDAGDYMWSLISSNNVTELLSNSLALSCKTPSNKEEEEQSFKDGFPAWVKPGDRKLLQSSSPASQANVVVANDGSGKFTTVKAAVSAAPSSSSSRYVIYVKAGVYNEQVEITKKNIMLVGDGTGKTIITGSKSVGGGTTTFRSATVAAVGDGFIARDITFRNTAGASNHQAVAFRSGSDLSVFYRCGFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIYARNPPQKTITVTAQGRTDPNQNTGIIIHNSKVTAASGLNPSSVKAYLGRPWQKYSRTVFMKTYLDSLINSAGWMAWSGNFALDTLYYAEYANTGPGSSTANRVKWKGYHVLASASQASQFTVANFIAGNSWLPATNVPFTSGL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0953 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 172 IPR035513 -
Bisa10g0953 518 ProSitePatterns Pectinesterase signature 1. 237 256 IPR018040 -
Bisa10g0953 518 Pfam Plant invertase/pectin methylesterase inhibitor 28 171 IPR006501 GO:0004857
Bisa10g0953 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Bisa10g0953 518 SMART PMEI_2 24 171 IPR006501 GO:0004857
Bisa10g0953 518 Gene3D - 207 518 IPR012334 -
Bisa10g0953 518 FunFam Pectinesterase 206 518 - -
Bisa10g0953 518 NCBIfam pectinesterase inhibitor domain 7 171 IPR006501 GO:0004857
Bisa10g0953 518 PANTHER PECTINESTERASE 13 510 - -
Bisa10g0953 518 Pfam Pectinesterase 212 504 IPR000070 GO:0030599|GO:0042545
Bisa10g0953 518 SUPERFAMILY Pectin lyase-like 206 517 IPR011050 -
Bisa10g0953 518 CDD PMEI-like_3 31 174 - -
Bisa10g0953 518 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0953 Bisa-ChrBisa10 22780983 22784883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0953 1 518 Carbohydrate Esterase AT2G45220 65.326 0.0 685