Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0952 ATGACATCTGGTCATCATCCATGTGCTTTCTTTCCTCAGCTGGCTATAAATCAGCATCCCACAACACCACCCTCCATGCACAGTACTCATCACCAAAAAATGGCCACTTCTCCCCCCGCCCCCGCTCCCGCCGTCGCCGCCTTCTTCCGCCTCCTCCTCTTAGCAGCTGTCACCGCCACTGCCTTCTGCCACCGTGAACCGGAGGTGATTCGGATGGCTAGAGCCCAAGTTCGCCAAGCCAAGACCTGGGTTCTTCAGAGTGGCTCCGTTGACACGGTCCTTTCATCATCATCATCACAAACAGGTGTGGGTGTGGCTCTTAGAGACTGTGCCAAGCTGTATGAAGAGAGTGACGCTAGACTTGCCCACATGGTGTCTAAGGAGAAGAGATCAGTTGATTTTAGCAGAGAAGATGCTCTCACGTGGGTGAGTGCTGTGATGACGAACCATAGGACTTGTTTGGATGGATTGTTGGAAAAAGGGTATGGCCAAGTTCATGATCAGGTTTTGGCTAAGAACTTGACTTTGTTGCTTCGGGAAGCTCTTGATTTGTCCGCAAAAAAAAAAAGGACAAAGGAAAAGGTAAGACCACCGGCACGGGGAAGCATATCCAAGTCATACAATGGGCTATTGGCATCGTGGAGCCCAGCCACATGGAAGGCAGATTTCACAGTGGCGCAGGATGGTTCGGGCACTTATAGAACCATTGGAGAAGCAGTCGACGCAGTGGCTTCAATGGGACATAACCGTCCTGAGAGAGTAGTTATTCATGTCAAAGCAGGAGTTTACAATGAGAAGGTGGAGATTGGGTTCAGGCTCAAGAATGTCATGCTTGTTGGAGATGGCGTTGACCGCACCGTCGTCACTGGTAGCAGAAGTGTTATTCAGGGCTCTTTCACTGTCGACTCAGCCACATTTGCTAAGCCAGGCCATTATCTGTGGATCAGTTTTTGGTTGGAGATAGGTGGATTCCGACCACCAGAGCGCCCTTCTCGGCCGGAATTTAAGTAG 1011 0.5074 MTSGHHPCAFFPQLAINQHPTTPPSMHSTHHQKMATSPPAPAPAVAAFFRLLLLAAVTATAFCHREPEVIRMARAQVRQAKTWVLQSGSVDTVLSSSSSQTGVGVALRDCAKLYEESDARLAHMVSKEKRSVDFSREDALTWVSAVMTNHRTCLDGLLEKGYGQVHDQVLAKNLTLLLREALDLSAKKKRTKEKVRPPARGSISKSYNGLLASWSPATWKADFTVAQDGSGTYRTIGEAVDAVASMGHNRPERVVIHVKAGVYNEKVEIGFRLKNVMLVGDGVDRTVVTGSRSVIQGSFTVDSATFAKPGHYLWISFWLEIGGFRPPERPSRPEFK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0952 336 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 187 IPR035513 -
Bisa10g0952 336 PANTHER PECTINESTERASE 95 310 - -
Bisa10g0952 336 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 91 174 IPR035513 -
Bisa10g0952 336 SMART PMEI_2 54 184 IPR006501 GO:0004857
Bisa10g0952 336 CDD PMEI-like_4 49 188 - -
Bisa10g0952 336 Gene3D - 216 316 IPR012334 -
Bisa10g0952 336 Pfam Plant invertase/pectin methylesterase inhibitor 89 167 IPR006501 GO:0004857
Bisa10g0952 336 SUPERFAMILY Pectin lyase-like 217 315 IPR011050 -
Bisa10g0952 336 Pfam Pectinesterase 222 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0952 Bisa-ChrBisa10 22749365 22763343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0952 45 314 Carbohydrate Esterase AT3G60730 41.414 1.12e-58 195