Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0950 ATGGAGAAGCCACCACTCGTTCATTGGGTTCCAAATGTCGGAACCCACCTTGGCTCTAGCTGCAAGACTCTGTCCAATAAGGAGGAAGAAGAACAATCTTATAAAGATGGGTTTCCGGCATGGGTTAAGCCCGGTGATCGGAAGCCGTTGCAATCTTCTTCTCCGGCTTCTCAGGCTAATGTCATGGTGGCCAATGACGGGTCTGGCAAGTTCACGTCGGTGAAGGCCGCCGTGAGTGCTGCACCGTCGAGTAGTAGCAGTAGGTATGTGATCTACGTGAAGGCAGGAGTGTATAATGAACAAGTTGAGATAACGAAAAGAAATATAATGCTTGTGGGAGATATTACAGTGAAGACTATTATTACTGGTAGCAAAAGTGTTGGAGCAGGCACCACAAACCTTCCGTTCAGCCACTGTCGGTAA 423 0.4823 MEKPPLVHWVPNVGTHLGSSCKTLSNKEEEEQSYKDGFPAWVKPGDRKPLQSSSPASQANVMVANDGSGKFTSVKAAVSAAPSSSSSRYVIYVKAGVYNEQVEITKRNIMLVGDITVKTIITGSKSVGAGTTNLPFSHCR 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0950 140 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bisa10g0950 140 MobiDBLite consensus disorder prediction 37 58 - -
Bisa10g0950 140 Gene3D - 54 137 IPR012334 -
Bisa10g0950 140 SUPERFAMILY Pectin lyase-like 54 133 IPR011050 -
Bisa10g0950 140 Pfam Pectinesterase 60 132 IPR000070 GO:0030599|GO:0042545
Bisa10g0950 140 ProSitePatterns Pectinesterase signature 1. 85 104 IPR018040 -
Bisa10g0950 140 PANTHER PECTINESTERASE 40 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0950 Bisa-ChrBisa10 22720757 22721383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0950 35 134 Carbohydrate Esterase AT2G45220 64.000 1.27e-34 124