Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0949 ATGACACCTGGTCATCATCCATGTGCTTTCTTTCCTCAGCTGGCTATAAATCAGCATCCCACAACACCACCCTCCATGCACAGTACTCATCACTCAAAAATGGCCACTTCTCCCCCCGCCCCCGCCCCCGCCGTCGCCGCCTTCTTCCGCCTCCTCCTCTTAGCCGCTGTCACCGCCACTGCCTTCTGCCACCGTGAACCGGAGGTGCTTCAGATGGCTAGAGCCCAAGTTCGCCAAGCCAAGACCTGGGTTCTTCAGAGTGGCTCCGTTGACACGGTCCTTTCATCATCATCATCATCACAAACAGGTGTGGGTGTGGCTCTTAGAGACTGTGCCAAGCTGTATGAAGAGAGTGACGCTAGACTTGCCCACATGGTGTCTAAGGAGAAGAGATCAGTTGATTTTAGCAGAGAAGATGCTCTCACGTGGGTGAGTGCTGTGATGACGAACCATAGGACTTGTTTGGATGGATTGTTGGAAAAAGGGTATGGCCAAGTTCATGATCAGGTTTTGGCTAAGAACTTGACTTTGTTGCTTCGGGAAGCTCTTGATTTGTACGCAAAAAACAAGGACAAAGGAAAAGGACCACCAGCACGGGGAAGCATATCCAAGTCATACAGTGGGCTATTGGCATCGTGGAGCCCAGCCACATGGAAGGCAGATCTCACAGTGGCGCAGGATGGTTCGGGCACTCATAGAACCATTGGAGAAGCAGTCGACGCAGTGGCTTCAATGGGACATAACCGTCCTGAGAGAGTAGTTATTCATGTCAAAGCAGGAGTCTATAATGAGAAGGTGGAGGTTGGGTTCAGGCTCAAGAATGTCTTGCTTGTTGGAGATGGCGTTGACCGCACCGTCGTCACTGGTAGCAGAAGTGTTGGTCAGGGCTCTTCAACTGTCGGCTCGGCCACATTTGATGTGTCAGGGGATGGGTTCTGGGCAAGGGACATGACATTTGAGAACAGAGCAGGCTCAGAGAACCACCAAGCGGTGGCTTTAAAAGTGAGCTCAGACCTCTCAGTGTTCTACAGATGCAGCTTCAAAGGTTACCAAGACACTCTCTTCGTCCACTCCAATCGCCAATTCTATCGAGACTGCCTCATTTATGGCACAATCGATTTCATATTCGGGGACGCCTCAGTTATCTTCCAGAACTGCGACATTCTGGTGCGAAAGCCCATGCCCCACCAGGCTAACCTAATCACAGCACAGGGCAGAGACGACCCCAACGAACCCACAGGGATTTCGATCCAGAATTGCAGGGTACGACCGGCCTCTGATTTGGCCCTAGTCAAGGGTCAATTCAAGAGCTATTTGGGAAGGCCATGGAAGAAGTACTCGAGGACTGTGTTCTTGAAGAGTGATCTGGATGGATTGATTGACCCTCAAGGGTGGAAGGAATGGAATGGTAATTTTGCACTTGAAACTTTGTACTTTGCAGAGTACATGAACACTGGCACTGGGGCTTCCACACAACATAGGGTGAACTGGCCTAGTTTTCATGTGTTGACAAGTCCTAGCCAGGCCAGGCCATTCTCTGTGGATCAGTTTTTGACTGGAGATAGGTGGATTCCGGCCACCGGCGTGCCATTCTCGACCGAAATTTGA 1608 0.5106 MTPGHHPCAFFPQLAINQHPTTPPSMHSTHHSKMATSPPAPAPAVAAFFRLLLLAAVTATAFCHREPEVLQMARAQVRQAKTWVLQSGSVDTVLSSSSSSQTGVGVALRDCAKLYEESDARLAHMVSKEKRSVDFSREDALTWVSAVMTNHRTCLDGLLEKGYGQVHDQVLAKNLTLLLREALDLYAKNKDKGKGPPARGSISKSYSGLLASWSPATWKADLTVAQDGSGTHRTIGEAVDAVASMGHNRPERVVIHVKAGVYNEKVEVGFRLKNVLLVGDGVDRTVVTGSRSVGQGSSTVGSATFDVSGDGFWARDMTFENRAGSENHQAVALKVSSDLSVFYRCSFKGYQDTLFVHSNRQFYRDCLIYGTIDFIFGDASVIFQNCDILVRKPMPHQANLITAQGRDDPNEPTGISIQNCRVRPASDLALVKGQFKSYLGRPWKKYSRTVFLKSDLDGLIDPQGWKEWNGNFALETLYFAEYMNTGTGASTQHRVNWPSFHVLTSPSQARPFSVDQFLTGDRWIPATGVPFSTEI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0949 535 FunFam Pectinesterase 215 535 - -
Bisa10g0949 535 Pfam Plant invertase/pectin methylesterase inhibitor 88 168 IPR006501 GO:0004857
Bisa10g0949 535 Gene3D - 215 535 IPR012334 -
Bisa10g0949 535 Pfam Pectinesterase 221 521 IPR000070 GO:0030599|GO:0042545
Bisa10g0949 535 SUPERFAMILY Pectin lyase-like 216 533 IPR011050 -
Bisa10g0949 535 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
Bisa10g0949 535 CDD PMEI-like_4 49 189 - -
Bisa10g0949 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 187 IPR035513 -
Bisa10g0949 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 98 175 IPR035513 -
Bisa10g0949 535 PANTHER PECTINESTERASE 93 525 - -
Bisa10g0949 535 SMART PMEI_2 54 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0949 Bisa-ChrBisa10 22690267 22697672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0949 45 535 Carbohydrate Esterase AT3G60730 54.143 0.0 569