Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0901 ATGGATCCTGTGGCTGCACAAGGGCGTCCTCTTCCTCCTCCTTTTTTGACCAGAGATCTTCATCTTCATCCCCATCACCAATTCCATAACAACCACCAAGCCAACGCAGGCACCGCCGAAGACGACCAGGAGGGTAATGGCAGCTTCAGCCGAGGCAACAAGCGAGATCGAGATCAAGAAGGGGCTGCAGGGGAGGGTAGAGAATTGGGGTCGAGCACGGGGCAGACGGGGGGCGATGGCGGCGGCGGGGAGAATTCCAGGAGGCCGCGGGGGAGGCCGGCGGGGTCGAAGAACAAGCCGAAGCCGCCGATCATCATAACGAGGGACAGCGCGAACGCGCTGAGGTCGCACGTGATGGAGATCGCGAACGGCGGCGACATCATGGAGAGTGTGGCGACGTTCGCGCGGCGAAGGCAACGGGGGGTTTGCATTCTGAGCGGGAGCGGCACAGTCACGAACGTCACGCTCCGGCAGCCCGCGTCCCCTGGTGCAGTCGTGACCCTGCACGGGAGGTTCGAGATTCTGTCGCTGTCGGGCTCGTTCCTGCCGCCACCTGCTCCCCCTGCTGCGTCGGGTCTGGCGATATACCTGGCCGGGGGGCAGGGGCAGGTGGTCGGGGGCACGGTGGTGGGGCCGCTGGTGGCTTCGGGGCCAGTGGTCATTATGGCGGCGTCGTTCGGGAATGCAGCGTACGAGAGGCTTCCGCTGGAGGAGGAGGAGACGCCGGTGGCGGTGCCGGGAAGCGGCGGAGGAGGGCTAGGGTCGCCGGGAATGGTGGGGCAACAGCAACAATCGCAGCAGCAACAGCAAATTGTGGGAGATCCAAACACATCATCGCTATTTCATGGAGTGCCTCAGAATCTCCTGAATTCATGCCAATTACCAGCTGAAGGCTACTGGGGAGGAGGCAGTGTTCGTCCTCCATTTTAA 930 0.628 MDPVAAQGRPLPPPFLTRDLHLHPHHQFHNNHQANAGTAEDDQEGNGSFSRGNKRDRDQEGAAGEGRELGSSTGQTGGDGGGGENSRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMESVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGTVVGPLVASGPVVIMAASFGNAAYERLPLEEEETPVAVPGSGGGGLGSPGMVGQQQQSQQQQQIVGDPNTSSLFHGVPQNLLNSCQLPAEGYWGGGSVRPPF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0901 309 MobiDBLite consensus disorder prediction 1 106 - -
Bisa10g0901 309 ProSiteProfiles PPC domain profile profile. 111 247 IPR005175 -
Bisa10g0901 309 Gene3D - 114 243 - -
Bisa10g0901 309 PIRSF ESCAROLA 16 308 IPR014476 GO:0003680
Bisa10g0901 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 288 IPR014476 GO:0003680
Bisa10g0901 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 227 IPR005175 -
Bisa10g0901 309 MobiDBLite consensus disorder prediction 47 64 - -
Bisa10g0901 309 CDD DUF296 115 182 IPR005175 -
Bisa10g0901 309 MobiDBLite consensus disorder prediction 239 277 - -
Bisa10g0901 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 247 - -
Bisa10g0901 309 FunFam AT-hook motif nuclear-localized protein 114 241 - -
Bisa10g0901 309 MobiDBLite consensus disorder prediction 257 277 - -
Bisa10g0901 309 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0901 Bisa-ChrBisa10 21169609 21170538 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0901 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.420 8.08e-87 261