Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0855 ATGGATAACAATGGGTCATCTTCGCCCGGGTATCCCAGACCTTTGCCGTACTCGCGCAGTCCATCGCCTTTGTACTATCCACCTGCAGGTTCAGATCCGTATTCACCTGTTCCTCCTTACGCATACCCATTCAATCATTATTCACAACCCTTCAACCATCTCTACCATCACCACCTTCCTCCACCTCCTCCTCCTTCTGGTGCTTCTGGGTCTCCACCGACTTCTTCCTCTCATTCTTCCTCCCATTCTGTTCAGTTAGACTACAATCAACCTTATTACTGTTACCCTCCTTACTATTACCCTCCCCACCGAGTTCATCCACCCACCCATAGTTCTCAATCTTCCGTTTCATACCCTTGTAATTTTCAGTTGGCGTCACCTAGGTACCATCTTTATGGTCTATTCGAGGCACATCAGCCTCTTGAAACCCGGACCTTAAGTCATTCACGATCCCACAGCTACTCCGGTCCATACGATCTGCAGAGCCAGAGCTCGACAGGAGGTGGTGGGTCGTCGTTGCAAACCGACGATGGTTCGAAGTCGATTACTCGTCGGAAATCTGCTTACCGATCTCCCGTGGATGATATTGTGATTAACGCTCAATATCCCGAGGATCGGCATCCTTCTCCTCCTAAATCCTCAGTTGAGCAGCGACAGTTCAGGCATTCCATTTCGATTCCGAAGGACGGAAAAAGGCAAGAGGACTTTTATTCCCTTCGTCGGAACTCGTTCTCGGGTTGGGAATCCGCGCACTTTAATCAGCTGAGTTCTCATTCTTCTCAAGTTGAAGCTCATGCGCATGCGGGGTCGTTTCTTGAAATTACGCATAATCAGAATCTAGAGATTATTTCTGCCTCGACTAAAGGGCCAGCGAAACAATTGCTTCTACATGGGAATTTAGATATATGGGTTCATGGAGCCAAAAATCTTCCAAATATGCATTACTTCCGCAAGACTTTTGGCGGGATGTTCAGCAAATTACCTGGGGGTTGTGAAGGAAAGGTTACTACTGATCCTTATGTAATAATTTCAGTAGCAACTGCTGTAATTGGGAGGACTTTTGTGATTAACAGCTGTGAAAATCCTGAGTGGATGCAACAATTTTATGTTCCCATTGCGCATCATGCTGCTGAAGTGCATTTTGTTGTCAAAGACAGTGATATTGTGGGTTCACAACTCATAGGCAGTGTGGCAATTCCGGTGGAACAGATACACTCAGGAGCAAAAGTAGAAGGTACCTACCCTATATTGAATACTAGCGGGAGGCCTTGTAAGCAGGGTGCTTCATTGACTCTATCCATTCAGTACATTCCAATTGAAACACTGAGCCATCATTATCAAGGAGTACGGCCAGACAGCAATGGGGTTCCTGGCACATATTTTCCTCTTAGGAAAGGTGGAACTGTTAATCTATATCAAGATGCCCACGTACCAGATGGCTTACTCCCTCCTGTGATGCTTGACCGAGGGAAATATCACGTTCATGGAAAGTGTTGGCATGATATCTTCAATGCCATACGCCAAGCTCGGCGGTTGATTTATATTACAGGGTGGTCAGTTTGGCACAAAGTTAAGTTGGTAAGGGATGTTGGTTATCCAAAAAATTGCACCCTGGGAGATATTCTGAGGTTAAAGTCACAAGAAGGTGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACGTCAAGGAATATTCTTGGTTACAAAACTGATGGTTTCATGGCAACTCATGATGAAGAAACTAGACGATTTTTCAAACACTCGTCAGTGAAAGTGCTGCTTTGTCCCCGAATTGCTGGAAAGCGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAAAAAACTGTTATTGTGGATGCTGATGCCGGAAATAACAAAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATTACCCCCACCATCCAATCTTTAGAACACTCAGCACGTTGCATAAGGAAGACTATCATAACCCTACTTTCACGGGAAACATTGGAGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGGCCAGCAGCTTATGATGTTCTGACCAACTTTGAGGAGCGCTGGAAAAGAGCTTCAAAACCTCATGGGCTTCGAAAATTGAAAACTTCATATGATGATGCTTTGCTTAAGCTGGAAAGACTTCCAGACATTATTAACATGTCTGATACTAGCGTTATAGATGATAATGATCCTGAAGCTTGGCATGTTCAGATATTTCGGTCAATAGATTCAACTTCTGTTAAGGGCTTTCCAAAGGACCCAAAAGACGCAACAAAGAAGAACCTGGTATGTGGGAAGAATTTACTGATTGACATGGGCATACATACAGCATATGTAAAGGCCATCCGTGCTGCTCAGCATTACATTTATATAGAAAATCAATATTTCATTGGGTCTTCATACAACTGGAGTCAATATAAAGACTTGGGTGCTAATAACTTAATTCCAATGGAAATTGCCCTTAAGATTGCTGCAAAGATAAAAGCAAATGAGAGATTTGCTGTGTATATTATTATACCAATGTGGCCAGAGGGTGTTCCGACAGGGGCTGCCACACAGAGGATTCTGTATTGGCAGCAAAAAACAATGCAAATGATGTATGAGATGGTTTGCAAGGCTTTGGTTGAGGCTGGGTTAGAAGAAGCATTCTCTCCGCATGACTACTTAAACTTTTTCTGTCTTGGCAATCGCGAGATTATAGATATGTATGATTATAATAATATGGTTGGAACTCCTCCACCAGCAAATAGTCCTCAAGCATTTAGTCGAAATAGCCATCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTCATTATACATGGGAAAGAAGACATTCTTGTCCTCGTGGACAGATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACAATTGAAGAGTGCTTCATGCAGCCCCAGAGCCTTGAATGTGTAAGAAGGATTAGAGCAATGAGTGAAATGAATTGGATGCAATTTGCATCAAATACAATATCAGAGATTAGAGGGCACCTTCTCAAATACCCAGTAGAAATCGATCGAAGGGGCAAGGTTAGATCCCTTCCCGGCCACGAAGAGTTCCCCGATGTTGGAGGGAAAATAATTGGATCATTCCTTGCCATTCAGGAGAATCTAACCATTTGA 3309 0.434 MDNNGSSSPGYPRPLPYSRSPSPLYYPPAGSDPYSPVPPYAYPFNHYSQPFNHLYHHHLPPPPPPSGASGSPPTSSSHSSSHSVQLDYNQPYYCYPPYYYPPHRVHPPTHSSQSSVSYPCNFQLASPRYHLYGLFEAHQPLETRTLSHSRSHSYSGPYDLQSQSSTGGGGSSLQTDDGSKSITRRKSAYRSPVDDIVINAQYPEDRHPSPPKSSVEQRQFRHSISIPKDGKRQEDFYSLRRNSFSGWESAHFNQLSSHSSQVEAHAHAGSFLEITHNQNLEIISASTKGPAKQLLLHGNLDIWVHGAKNLPNMHYFRKTFGGMFSKLPGGCEGKVTTDPYVIISVATAVIGRTFVINSCENPEWMQQFYVPIAHHAAEVHFVVKDSDIVGSQLIGSVAIPVEQIHSGAKVEGTYPILNTSGRPCKQGASLTLSIQYIPIETLSHHYQGVRPDSNGVPGTYFPLRKGGTVNLYQDAHVPDGLLPPVMLDRGKYHVHGKCWHDIFNAIRQARRLIYITGWSVWHKVKLVRDVGYPKNCTLGDILRLKSQEGVRVLLLVWDDPTSRNILGYKTDGFMATHDEETRRFFKHSSVKVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNKRKIIAFVGGLDLCDGRYDYPHHPIFRTLSTLHKEDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWKRASKPHGLRKLKTSYDDALLKLERLPDIINMSDTSVIDDNDPEAWHVQIFRSIDSTSVKGFPKDPKDATKKNLVCGKNLLIDMGIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQYKDLGANNLIPMEIALKIAAKIKANERFAVYIIIPMWPEGVPTGAATQRILYWQQKTMQMMYEMVCKALVEAGLEEAFSPHDYLNFFCLGNREIIDMYDYNNMVGTPPPANSPQAFSRNSHRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWERRHSCPRGQIHGYRMSLWAEHTGTIEECFMQPQSLECVRRIRAMSEMNWMQFASNTISEIRGHLLKYPVEIDRRGKVRSLPGHEEFPDVGGKIIGSFLAIQENLTI 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0855 1102 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 948 975 IPR001736 GO:0003824
Bisa10g0855 1102 PANTHER PHOSPHOLIPASE D 292 1093 IPR015679 -
Bisa10g0855 1102 SUPERFAMILY Phospholipase D/nuclease 446 712 - -
Bisa10g0855 1102 Pfam Phospholipase D Active site motif 614 648 IPR001736 GO:0003824
Bisa10g0855 1102 Pfam Phospholipase D Active site motif 949 975 IPR001736 GO:0003824
Bisa10g0855 1102 Gene3D C2 domain 296 448 IPR035892 -
Bisa10g0855 1102 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 613 648 IPR001736 GO:0003824
Bisa10g0855 1102 SUPERFAMILY Phospholipase D/nuclease 734 1034 - -
Bisa10g0855 1102 ProSiteProfiles C2 domain profile. 279 414 IPR000008 -
Bisa10g0855 1102 FunFam Phospholipase D delta 489 727 - -
Bisa10g0855 1102 Pfam Phospholipase D C terminal 1022 1092 IPR024632 -
Bisa10g0855 1102 MobiDBLite consensus disorder prediction 1 24 - -
Bisa10g0855 1102 CDD C2_plant_PLD 292 437 - -
Bisa10g0855 1102 SMART C2_3c 299 413 IPR000008 -
Bisa10g0855 1102 Gene3D Endonuclease Chain A 490 730 - -
Bisa10g0855 1102 SUPERFAMILY beta-sandwich domain of Sec23/24 10 1049 - -
Bisa10g0855 1102 MobiDBLite consensus disorder prediction 146 178 - -
Bisa10g0855 1102 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 296 439 IPR035892 -
Bisa10g0855 1102 Gene3D Endonuclease Chain A 763 996 - -
Bisa10g0855 1102 MobiDBLite consensus disorder prediction 56 70 - -
Bisa10g0855 1102 SMART pld_4 948 975 IPR001736 GO:0003824
Bisa10g0855 1102 SMART pld_4 613 648 IPR001736 GO:0003824
Bisa10g0855 1102 FunFam Phospholipase D 761 994 - -
Bisa10g0855 1102 MobiDBLite consensus disorder prediction 55 83 - -
Bisa10g0855 1102 Pfam C2 domain 298 416 IPR000008 -
Bisa10g0855 1102 MobiDBLite consensus disorder prediction 146 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0855 Bisa-ChrBisa10 19877955 19889455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0855 63 1102 Phospholipase D Gene Family (Wang group) AT2G42010 63.401 0.0 1352