Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0839 ATGGAAGAAGAGGACAACTTGGGAGAGGGTTCCATCATTGACAATGGTGTAATAAAGGAACAAGAATGCCTTCTTCCCATCGCCAATGTGGGTTGCATTATGAAGGTCGTCCTCTCTCGCAACGCCAAGACCTTGAAAGAAGCGAAGGAGACGATGCAGGAATGTGCATTAAAGTTCATCAGCTTCGTCACCAGCAAGGCCTCCCAAAGGTGCCGCAAGCAAAAGAGGAAGACCATCAACAGCGACAACATCTGCAAGGCCTTCACCTCTCTGGGCTTCGACGACTACACTACCCCACTAGCTACTTGCTTCGTTATAGAGAGCCACTACACAAGCACCATCAGCACTAAAGACAACTAG 360 0.4889 MEEEDNLGEGSIIDNGVIKEQECLLPIANVGCIMKVVLSRNAKTLKEAKETMQECALKFISFVTSKASQRCRKQKRKTINSDNICKAFTSLGFDDYTTPLATCFVIESHYTSTISTKDN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0839 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 87 IPR003958 -
Bisa10g0839 119 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 102 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa10g0839 119 Gene3D Histone, subunit A 13 116 IPR009072 GO:0046982
Bisa10g0839 119 SUPERFAMILY Histone-fold 21 102 IPR009072 GO:0046982
Bisa10g0839 119 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Bisa10g0839 119 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0839 Bisa-ChrBisa10 19532749 19533108 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0839 17 100 CCAAT-HAP3 Transcription Factor Family AT2G47810 64.286 5.81e-35 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa10g0839 CBFD_NFYB_HMF 1.7e-17 CL0012