Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0836 ATGGAAGAAGAGGACAACTTGGGAGGGGGTTCCATCATTGACAATGGTGTAATAAAGGAACAAGAATGCCTTCTTCCCATCGCCAATGTGGGTTGCATTATGAAGCCCGTCCTCTCTCGCAACGCCAAGACCTTGAAAGAAGCGAAGGAGACGATGCAGGAATGTGCATCAAAGTTCATCAGCTTCGTCACCAGCGAGGCCTCCCAAAGGTGCCGCAAGCAAAAGAGGAAGACCATCAACAGCGACAACATCTGCAAGGCCTTCACCTCTCTGGGCTTCGACGACTACACTACCCCACTAGCTACTTGCTTCGTTACAGAGAGCCATTACACAAGCACCATCAGCACTAAAGACAACTAG 360 0.5 MEEEDNLGGGSIIDNGVIKEQECLLPIANVGCIMKPVLSRNAKTLKEAKETMQECASKFISFVTSEASQRCRKQKRKTINSDNICKAFTSLGFDDYTTPLATCFVTESHYTSTISTKDN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0836 119 SUPERFAMILY Histone-fold 21 102 IPR009072 GO:0046982
Bisa10g0836 119 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Bisa10g0836 119 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bisa10g0836 119 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 103 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa10g0836 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 87 IPR003958 -
Bisa10g0836 119 Gene3D Histone, subunit A 13 117 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0836 Bisa-ChrBisa10 19514601 19514960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0836 17 100 CCAAT-HAP3 Transcription Factor Family AT2G47810 66.667 1.37e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa10g0836 CBFD_NFYB_HMF 1.1e-18 CL0012