Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0810 ATGGATTACCCGACCAATTTTGACTCCGATCTTGCACTTCTAGAATCCATCCGAAGCTATCTTCTCGACGACAATTCCGATGCTCTCGTAGCACTTCCGGCCACATTCGCCGGCGATGCTCCGGATTGCTTCCAGAGTCCTAGCTCCGGGACGACGGAGAGCAGCGATTGTGACACTAATGCTACTTCTTTTTCATCGGAACCAGCAAACATTGCTAGCGCCGAGGTCTGTAGTGCTCAAGGCAACCAAGTTACCGCGGCGCGTGTGGTTCACGCTTCACCGAGTGCGAGTGGGAGAAGTTACAGGGGAGTGAGGCGCAGACCTTGGGGGAAATATGCTGCGGAGATTAGGGATCCGAAGAAGAACGGCGCGAGAGCGTGGCTCGGGACTTACGAGACGGCTGAGGACGCGGCTTTGGCTTATGATCGAGCCGCTTTCAAGATGCGTGGCTCGAAAGCCAAGCTGAACTTTCCACATCTAATTGACTCCAATGCGTCGGAGCCGCCCAGGGTGACCGGAAAGCGCCGTATGCCGGAGCCTTGCTCTCCGTCATCTGAGGATGAGTGGTCGGAGATGAAACGGAAGAAGAGTCGAGTAAGCATCTTGGACACATCTGAGCCGAAGGATGGAAACCGAGCCGTGGAGTTAGGGATGGGGTCCACAGCATTTTTTGGTGAATTGTTAAATACTACTGTAACCCCTGACCAAACGTGTGAATTAGGATTTTATCAATTTATTAATTCTTGTCCTAATTTGTAA 759 0.5217 MDYPTNFDSDLALLESIRSYLLDDNSDALVALPATFAGDAPDCFQSPSSGTTESSDCDTNATSFSSEPANIASAEVCSAQGNQVTAARVVHASPSASGRSYRGVRRRPWGKYAAEIRDPKKNGARAWLGTYETAEDAALAYDRAAFKMRGSKAKLNFPHLIDSNASEPPRVTGKRRMPEPCSPSSEDEWSEMKRKKSRVSILDTSEPKDGNRAVELGMGSTAFFGELLNTTVTPDQTCELGFYQFINSCPNL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0810 252 SUPERFAMILY DNA-binding domain 101 159 IPR016177 GO:0003677
Bisa10g0810 252 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Bisa10g0810 252 MobiDBLite consensus disorder prediction 160 211 - -
Bisa10g0810 252 Pfam AP2 domain 101 150 IPR001471 GO:0003700|GO:0006355
Bisa10g0810 252 MobiDBLite consensus disorder prediction 180 210 - -
Bisa10g0810 252 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Bisa10g0810 252 CDD AP2 101 160 IPR001471 GO:0003700|GO:0006355
Bisa10g0810 252 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Bisa10g0810 252 PRINTS Ethylene responsive element binding protein signature 140 160 IPR001471 GO:0003700|GO:0006355
Bisa10g0810 252 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Bisa10g0810 252 PANTHER DNA-BINDING DOMAIN 65 195 IPR044808 GO:0003700|GO:0009873
Bisa10g0810 252 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0810 Bisa-ChrBisa10 18840715 18841473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0810 85 199 AP2-EREBP Transcription Factor Family AT2G44840 64.348 4.10e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g0810 AP2 7.1e-14 CL0081