Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0809 ATGGCTACCACCACTATGGATTCCGATTTCCCTCGTTTGGGATGTGTTCATCAATACTTGTTTCAAATTCAACCTGTTTCCATGTCTCCCTTGAATGCTTCGAGAAACAACCCTAGTTCTTCAACCAGTGTTTCTAACTCCGATACCTGCACGGTTAAATTGGCCTCCAGTACTACAGCTCCAGTGGCAGCGCGTGAGGCGCACGCGCCACCGAGGTGGAAGCAATACAGGGGCGTGAGGCGGAGGCCGTGGGGGAAGTTTGCGGCGGAGATCAGGGACCCCAAGAAGAACGGCGCTAGGGTTTGGCTGGGGACCTACGAGACGGAAGAGGAAGCCGCTTTGGCTTATGACAAGGCCGCTTTCAAGATGCGTGGTAGCAAGGCCAAGTTGAACTTCCCGCACCTGATTGGCTCCGACGACGCGGCGGCGCCCGAGTCGGTGAGTGCGTCGACTCCGAAGCGGCGATCGCCGGAGAGTTCTTTTTCGCCGATATCTGATTCCGGTGAGGATGGTTCGCGAGAATCAAAGAGGAGGAAGAGCTTGCCTAGTTTGTTGAATAGGCTGGCCAAGAACAGAAGCCAAGTGGGGGTGTTTGATACGGGCACAAATGCGATTATTGATAAGTGGTTGAATTTGAATGTATTGGAAGATAGGAGTCTAATATGCTTAAGATGA 675 0.5274 MATTTMDSDFPRLGCVHQYLFQIQPVSMSPLNASRNNPSSSTSVSNSDTCTVKLASSTTAPVAAREAHAPPRWKQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEEAALAYDKAAFKMRGSKAKLNFPHLIGSDDAAAPESVSASTPKRRSPESSFSPISDSGEDGSRESKRRKSLPSLLNRLAKNRSQVGVFDTGTNAIIDKWLNLNVLEDRSLICLR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0809 224 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Bisa10g0809 224 MobiDBLite consensus disorder prediction 141 179 - -
Bisa10g0809 224 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Bisa10g0809 224 FunFam Ethylene-responsive transcription factor 2 74 134 - -
Bisa10g0809 224 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Bisa10g0809 224 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Bisa10g0809 224 MobiDBLite consensus disorder prediction 149 168 - -
Bisa10g0809 224 PANTHER DNA-BINDING DOMAIN 45 172 IPR044808 GO:0003700|GO:0009873
Bisa10g0809 224 PRINTS Ethylene responsive element binding protein signature 115 135 IPR001471 GO:0003700|GO:0006355
Bisa10g0809 224 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Bisa10g0809 224 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Bisa10g0809 224 CDD AP2 74 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0809 Bisa-ChrBisa10 18828438 18829112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0809 64 162 AP2-EREBP Transcription Factor Family AT2G44840 72.000 6.32e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g0809 AP2 5.9e-16 CL0081