Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0808 ATGTGCACCCCGTTTTCACAAGTCGGTGCCTTCGTCGTCGATAGTTCCGAACCTTCGACCATGTCGACAACAGCCGCAACGATGTCGTTTCAGAATGCTGCTCCACCGGCGTACTCTCGCAGTTCGAGCTTCCGAAACGTCTTCTTAACGGAAAGCTGGAGTGATGTTCCTCTGAAAGAGAACGACCCCAATGATATGCTTATCTATGGGGCTTTGCGTGATGCTGCCCTCACTGGATGGTTTCCCTCCAATGGAGTTCCTGCATCTGCAACAGCAAGTGGATGTCACGTGGGAGAAAATTACGAGAACAACAATCTCAACGTTAATAAGGGGGCGGAGGCGGTGGCACGTGGGTGTCACGTGCCGAGGGACGAAAGGCGGTACAGGGGAGTGCGGAGGAGGCCGTGGGGTAAGTACGCGGCGGAGATAAGGGATCCGAAGAAGAACGGTGTGAGGGTGTGGCTTGGGACTTATGAGACGGCTGAGGATGCGGCTCTGGCTTATGACCAAGCCGCATTTAAGATGCGCGGCTCCAAAGCGAAGCTGAATTTTCCTCACTTGATTGGCTCGGATCAAGCCGAGCCCGTTCGAGTCACTCTCAAGCGCCGTTCACCTGAGATGCCACTCTCAAGCGCCGGAGAGAAGAGGGTTAAGCCGATGGGTGGAGCCGTGGCTACAGCTACAACTAGTACGGAGGTGGGTAAGGGAATTAAGTGGCAATTTTCCATGGATAATCAAACCTTGCTGCAATAA 753 0.5392 MCTPFSQVGAFVVDSSEPSTMSTTAATMSFQNAAPPAYSRSSSFRNVFLTESWSDVPLKENDPNDMLIYGALRDAALTGWFPSNGVPASATASGCHVGENYENNNLNVNKGAEAVARGCHVPRDERRYRGVRRRPWGKYAAEIRDPKKNGVRVWLGTYETAEDAALAYDQAAFKMRGSKAKLNFPHLIGSDQAEPVRVTLKRRSPEMPLSSAGEKRVKPMGGAVATATTSTEVGKGIKWQFSMDNQTLLQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0808 250 Gene3D AP2/ERF domain 126 186 IPR036955 GO:0003700|GO:0006355
Bisa10g0808 250 SMART rav1_2 127 191 IPR001471 GO:0003700|GO:0006355
Bisa10g0808 250 ProSiteProfiles AP2/ERF domain profile. 127 185 IPR001471 GO:0003700|GO:0006355
Bisa10g0808 250 FunFam Ethylene-responsive transcription factor 2 126 186 - -
Bisa10g0808 250 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Bisa10g0808 250 PRINTS Ethylene responsive element binding protein signature 167 187 IPR001471 GO:0003700|GO:0006355
Bisa10g0808 250 PANTHER DNA-BINDING DOMAIN 100 203 IPR044808 GO:0003700|GO:0009873
Bisa10g0808 250 SUPERFAMILY DNA-binding domain 127 186 IPR016177 GO:0003677
Bisa10g0808 250 Pfam AP2 domain 127 177 IPR001471 GO:0003700|GO:0006355
Bisa10g0808 250 CDD AP2 135 187 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0808 Bisa-ChrBisa10 18791117 18791869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0808 38 210 AP2-EREBP Transcription Factor Family AT2G44840 57.471 8.74e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g0808 AP2 1.1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0808 10 18791117 18791869 Bisa10g0808 10 18791117 18791869 ECH