Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0792 ATGGATTTCTTTTCTTACTGCAACTATTTGGTGATTAACAAACGAGGAAACGAGAAAGAAGACTCTGCTCATCTGCTGCATATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAGGGGAAGGTGGCGTTAGAGTTATCTTCTGCTTCTTCAGATTCGTTTCCTTTGCTTCTGCTGCATCCACCACTACAAAAGTGGACCGACGACGAAGAAAATTGTTATGTGGGCACTGAGCCCACCTCAGTTCTTGACGCCAGAAGAAGCCCAAGCCCTCCTACATCCTCCTCATCTACGATGCCTTCTCACGGCAGCAATAGCGCCGCCGGAAGCTGTTCAACTAATAGCACCACCACCGGTGCCGGCGCAGCGGTCTCAGAAAATCCGTCTCAGGCAGCCTTAGACGCATCTAGCGCAGAGAAATGTGGGCTGCGAATGGAGGACTGGGAGGGCGTTTTGCCCGGGTCCCCAGGTCACGATCAGTCTATTCTGCGATTAATTATGGGTAATATTCAGGACCCTTCTGCGGGATTAAGCAATCTCTTGCAGAGCAGCGGTGATGGGTCTCAAATGGTTGATTTCAATGGAGGTTTTGGGGTTGTGGATCAAGGGTTTGAGGTTGAACCCGTTACTTGTGGGAATATAGTGAGTAATATTGCAGAACCCATTTTTTCTGCTTCATCTAGCAATCCTCTAATGATGTCATCTTCAACGTTGGTGTTAAATTCTCAGCCGCAGCAAGGAGTTTCAATGGTAGAGGACAAGTCAAACCGAAATCAAGACGGTTACTCAGGGAACCCATCTTTCTTTATACCCTTGACATTCCCACAATGGCAAGAGCAGCAAGAATTTTCTCAGCCTCAAGCAAAACGCCCACTTTGTGACACAACTGGGCAACGTTATCAGGTCCAAAAGCCACCCTTCTTTGATTCTGGGCAGGAGCTATTTGTCAGAAGGCAGCAACTGCAACTTCCTTCACATCCTCAACATCTGCAGCAATGGCAATCCATTCTTGAGTCACCAGTGAAACCGCAGAAGGTGAGCTCCACTGGTGATGATTTGGTGACCCAACAACTTCAGCAGACTATAATTGATCAGATATTTAATGCTGCAGAGCTTATTGAAGCCGGTAACCTGGTACATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAAAGGGCTGCTTTCTACATGAAGGAAGCCTTGCAGTTACTGCTCCATTCAAATGCGCAAAGTTTGTTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGAGCTTATAAATCGTTCTCTGAGATATCTCCAGTCCTTCAGTTTGCCAATTTTACTAGTAATCAAGCCCTCATTGAAGCTGTGGAAAGATTTGATTGGATTCACATTATTGATTTTGATATCGGGTTTGGAGTGCAATGGGCTTCTTTTATGCAAGAGCTGGCCCTCAGAAATGGTGGGGCACCTTCACTTAAAGTTACAGCTGTTGTATTGCCATCCACCTACAATGAAGTCGAGCTCAGCTTTACTCAAGAAAGCTTGAAACAACATGCAAAAGAAATCAACATATCGTTTGAGTTCAATGTTATCAGCATTGAGTCATTAAACTCTCCTTCCTGGCCCTTGCCTGGCCAATTCCCTGACACCGAGGCAATTGCAGTGAATTTGCCAGTTTCTTGTTTCTCAAATTACCCATCATCCTTCCCTTTGGCCCTTCGCTTTGTAAAGCAGCTCATGCCAAAAATTGTGGTCACATTAGACAGGAATTGCGATCGGATTGATGTACCATTTCCCCACAATCTAATCCATGCTCTTCAATCTTACTCAGCCTTGCTTGAATCTCTGGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATCGAAAGGCATTTTGTCCAACCAGCCATCGAGAAGATCATACTTGGTCGCCACCATTCTAGAGACAAGTTACCCCCATGGAAGAGCCTGTTTCTATCATCTGGGTTCTCCCCATTCGCATTTAGTAACTCCACAGAAGCTCAAGCAGAGTGCTTGGTGCAGAGGGCACCTGTGAGGGGATTTCAGGTGGACAGGAAGCACTCTTCTCTGATTCTGTGCTGGCAGCGAAAGGAACTCGTCTCAGTTTCAACTTGGAGGTGCTGA 2163 0.4623 MDFFSYCNYLVINKRGNEKEDSAHLLHMKAMPLPFEEFQGKVALELSSASSDSFPLLLLHPPLQKWTDDEENCYVGTEPTSVLDARRSPSPPTSSSSTMPSHGSNSAAGSCSTNSTTTGAGAAVSENPSQAALDASSAEKCGLRMEDWEGVLPGSPGHDQSILRLIMGNIQDPSAGLSNLLQSSGDGSQMVDFNGGFGVVDQGFEVEPVTCGNIVSNIAEPIFSASSSNPLMMSSSTLVLNSQPQQGVSMVEDKSNRNQDGYSGNPSFFIPLTFPQWQEQQEFSQPQAKRPLCDTTGQRYQVQKPPFFDSGQELFVRRQQLQLPSHPQHLQQWQSILESPVKPQKVSSTGDDLVTQQLQQTIIDQIFNAAELIEAGNLVHAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSNAQSLLAFSPISFIFKIGAYKSFSEISPVLQFANFTSNQALIEAVERFDWIHIIDFDIGFGVQWASFMQELALRNGGAPSLKVTAVVLPSTYNEVELSFTQESLKQHAKEINISFEFNVISIESLNSPSWPLPGQFPDTEAIAVNLPVSCFSNYPSSFPLALRFVKQLMPKIVVTLDRNCDRIDVPFPHNLIHALQSYSALLESLDAVNVNLDVLQKIERHFVQPAIEKIILGRHHSRDKLPPWKSLFLSSGFSPFAFSNSTEAQAECLVQRAPVRGFQVDRKHSSLILCWQRKELVSVSTWRC 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0792 720 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 324 715 IPR005202 -
Bisa10g0792 720 ProSiteProfiles GRAS family profile. 353 719 IPR005202 -
Bisa10g0792 720 Pfam GRAS domain family 363 719 IPR005202 -
Bisa10g0792 720 MobiDBLite consensus disorder prediction 78 138 - -
Bisa10g0792 720 MobiDBLite consensus disorder prediction 83 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0792 Bisa-ChrBisa10 17826706 17829122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0792 362 720 GRAS Transcription Factor Family AT4G00150 57.735 7.47e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa10g0792 GRAS 1.7e-90 CL0063