Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0790 ATGAGCTGTATTTCCACACCGTTCTCCTTCCTTTCGTACTTCAATGCCGTAAATTTTTTCCAACATTTTTCCCTATCCCCACCAGGAGAATCATCTTTCTCTTCCACGGGTGCATTTCAACGAAAGGATGATTGGCGAGAGATAGGCACAAGCTTTGAGGGTTTGGCTCTGTTCTCTCTTATGCCCATCTCAATTCTTTCAGACCCTTATTTTCATGTGTCATCTCTTCCTCTCGCTTCCATTGCAGCAGCTTCATTTGAGTTTTGCATTTGTGAATCCAGATTTTCTCTGCCTTCGTATTTCGGTAATCTTCAGTTATTCAATGCTGCGAGTTTTCGTCTCCGTTATATGATGGAATTTCGTGGCTTTGCTAAAGGACTAGGTGAACATTATTGGGATATGAATCGTAGGGTGAGGAGGAAGGTCGCAAGGAAAGGAAAAGAGAAGGTGGTTTTGCCAAGTTATCCTGAAATTCAAGATGAGGTTTTGGATTTAGACCCTGAGAGAGTTGTTGATTGGAGGAGCTTACCTGATGACACAGTAATTCAGCTGTTTTCATGTCTGAGTTATCGGGACCGAGCAAGCTTATCATCAACTTGTAGAACATGGAGGCTTCTTGGTAACTCTCCATGTTTATGGACTTCCCTTGACCTTCGTTCTCACAGGTTTGATGCCACCATGGCATCTGCACTTGCTCCAAGGTGTGTGCATCTCCAGAAGCTTCGATTTCGTGGGGCTGAATCTGCTGATGCAATAATTCATCTTCAAGCTAGGAATTTACGTGAAATAAGTGGTGACTATTGCAGGAAGATTACTGATGCAACTCTTGCAGTAATTGTTGCCCGGCATGAGTCACTTGAGAGCCTTCAGCTTGGGCCAGATTTCTGTGAAAGAATCAGTAGTGATGCTATAAAAGCAATAGCTCATTGCTGTCATAGATTAAAGAAGCTTAGACTCTCAGGTATTAGGGATGTAAATTCTGATTCCATTAATGCCTTGGCTAAGTATTGTCCAGATTTGACTGATATTGGATTCATTGACTGCCTGAATGTTGATGAGCTAGCATTGGGAAATGTGCTATCAGTTCGATTCCTTTCAGTTGCTGGGACATCAAGTATGAAGTGGGGTGTGGTTTCCCATCTGTGGCATAAGCTGCCTAACCTTACGGGATTAGATGTATCAAGAACTGATATCGGTCCATCAGCTGTTTCAAGATTGTTATCATCACAGAGCTTGAAGGTTTTGTGTGCTCTGAATTGTCCTATCCTTGAAGAAGACACCAGCTTTTCGGCAAATAAATATAAAAAAAAACTATTAATTGCCCTCTTTACTGATATTTTTAAAGGACTAGCTTCTTTATTTTTTGATGATACAAAGAAAGGAAAAAATGTGTTTTTAGACTGGAGGAATGCGAAGAATAATGATAAGGACCTAAATGAAATTATGATCTGGCTTGAGTGGATCCTATCCCATACACTTCTGCGATCTGCTGAGAGCTCTCAACAGGGTCTGGATAATTTTTGGGTTGAACAAGGTGGAGCACTCTTGCTTAGTCTAATGCAGAGTCCCCAAGAGGATGTTCAGGAGAGAGCAGCCACGGGTCTTGCAACATTTGTTGTAATTGATGATGAAAATGCTAGCATTGATTGTGGAAGGGCTGAAGCAATTATGCGAGATGGTGGCATACGCCTCCTTCTTGGCTTGGCAAAATCATGGAGGGAAGGACTTCAGTCTGAGGCAGCTAAGGCGATTGCAAATTTGTCTGTCAATGCCAATGTAGCAAAAGCTGTTGCAGAAGAGGGCGGGATTGATATTCTCGCTGGTTTGGCTAGGTCTATGAACAAGCTGGTGGCTGAGGAGGCTGCTGGAGGATTGTGGAATCTATCTGTTGGAGAAGAGCACAAGGGTGCCATTGCTGAGGCTGGTGGAATACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTGGAACGTGCAGCTGGTGCCTTGGCTAATTTGGCTGCTGATGACAAGTGTAGCACAGAAGTTGCATTGGCTGGTGGTGTACATGCTTTAGTGATGCTTGCTCGCAACTGCAAATTCGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTGGCTGCTCATGGAGATAGCAACAGTAATAATGCTGCTGTTGGACAAGAAGCAGGTGCTCTAGAGGCACTTGTTCAACTTACCCGTTCTCCCCATGAGGGTGTAAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGATGATAGAAATCGAGAAGCCATTGCAGTGGCTGGTGGAGTTCAAGCCTTGGTCGCGCTAGCCCAGTCTTGTTCTAATGCCTCCCCTGGACTTCAGGAGAGGGCTGCTGGTGCTCTCTGGGGACTGTCAGTTTCTGAAGCCAATAGCATTGCTATTGGGCGAGAAGGTGGTGTTGCACCTTTGATTGCTCTGGCACGGTGTGAAGCTGAGGATGTTCATGAAACTGCTGCTGGAGCACTCTGGAACCTCGCTTTTAACCCTGGTAATGCTTTACGTATTGTGGAGGAAGGAGGAGTTTCTGCACTTGTTGATCTCTGTTCTACATCATTATCAAAGATGGCACGGTTCATGGCAGCATTGGCATTGGCTTACATGTTTGATGGGAGAATGGATGAATTTGCTTTGGTAGGCACCTCATCAGAAAGCATCTCTAAGAGTGTGAGCTTGGATGGAGCTAGAAGGATGGCTCTGAAACACATTGAAGCTTTCATTCTTATGTTTTCTGATCCGCAAGCATTTGCTGTTGCTGCTGCATCATCAGCTCCAGCAGCATTGGCTCAAGTTACTGAAAGCGCTCGAATTCAAGAAGCAGGACATCTTAGATGCAGTGGCTCTGAAATCGGAAGATTTGTTACTATGCTGCGAAACCCATCATCTATACTAAAAGCTTGTGCTGCATTTGCTCTTCTGCAGTTTACAATTCCTGGTGGAAGACACGCTATGCACCATGCTAGCCTCATGCAGAATGCAGGTGCAGCAAGAGTTCTTCGTGGAGCGGCTGCCTCTGCAATCGCCCCACTTGAAGCAAAAATATTTGCCAGAATTGTTCTTCGTAACCTTGAGTATCACCAGACGGATCAGCAATCAGTCTAG 3156 0.4468 MSCISTPFSFLSYFNAVNFFQHFSLSPPGESSFSSTGAFQRKDDWREIGTSFEGLALFSLMPISILSDPYFHVSSLPLASIAAASFEFCICESRFSLPSYFGNLQLFNAASFRLRYMMEFRGFAKGLGEHYWDMNRRVRRKVARKGKEKVVLPSYPEIQDEVLDLDPERVVDWRSLPDDTVIQLFSCLSYRDRASLSSTCRTWRLLGNSPCLWTSLDLRSHRFDATMASALAPRCVHLQKLRFRGAESADAIIHLQARNLREISGDYCRKITDATLAVIVARHESLESLQLGPDFCERISSDAIKAIAHCCHRLKKLRLSGIRDVNSDSINALAKYCPDLTDIGFIDCLNVDELALGNVLSVRFLSVAGTSSMKWGVVSHLWHKLPNLTGLDVSRTDIGPSAVSRLLSSQSLKVLCALNCPILEEDTSFSANKYKKKLLIALFTDIFKGLASLFFDDTKKGKNVFLDWRNAKNNDKDLNEIMIWLEWILSHTLLRSAESSQQGLDNFWVEQGGALLLSLMQSPQEDVQERAATGLATFVVIDDENASIDCGRAEAIMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARNCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAVAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARCEAEDVHETAAGALWNLAFNPGNALRIVEEGGVSALVDLCSTSLSKMARFMAALALAYMFDGRMDEFALVGTSSESISKSVSLDGARRMALKHIEAFILMFSDPQAFAVAAASSAPAALAQVTESARIQEAGHLRCSGSEIGRFVTMLRNPSSILKACAAFALLQFTIPGGRHAMHHASLMQNAGAARVLRGAAASAIAPLEAKIFARIVLRNLEYHQTDQQSV 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 601 643 IPR000225 GO:0005515
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 817 859 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 685 716 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 762 804 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 595 629 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 724 760 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 632 674 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam Armadillo/beta-catenin-like repeat 808 845 IPR000225 GO:0005515
Bisa10g0790 1051 Pfam F-box-like 173 219 IPR001810 GO:0005515
Bisa10g0790 1051 SMART LRR_CC_2 385 409 IPR006553 -
Bisa10g0790 1051 SMART LRR_CC_2 311 336 IPR006553 -
Bisa10g0790 1051 SMART LRR_CC_2 283 310 IPR006553 -
Bisa10g0790 1051 SMART LRR_CC_2 337 362 IPR006553 -
Bisa10g0790 1051 SMART LRR_CC_2 257 282 IPR006553 -
Bisa10g0790 1051 SUPERFAMILY ARM repeat 514 876 IPR016024 -
Bisa10g0790 1051 FunFam Protein ARABIDILLO 2 487 634 - -
Bisa10g0790 1051 ProSiteProfiles F-box domain profile. 170 216 IPR001810 GO:0005515
Bisa10g0790 1051 SMART fbox_2 176 216 IPR001810 GO:0005515
Bisa10g0790 1051 CDD F-box_AtADLO1-like 172 213 - -
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 642 687 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 806 846 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 590 630 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 721 761 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 847 888 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 631 674 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 762 805 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 550 589 IPR000225 GO:0005515
Bisa10g0790 1051 SMART arm_5 675 716 IPR000225 GO:0005515
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 560 602 IPR000225 GO:0005515
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 686 717 IPR000225 GO:0005515
Bisa10g0790 1051 Gene3D - 488 612 IPR011989 -
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 732 774 IPR000225 GO:0005515
Bisa10g0790 1051 Gene3D - 613 908 IPR011989 -
Bisa10g0790 1051 PANTHER PROTEIN ARABIDILLO 1 134 1048 - -
Bisa10g0790 1051 SUPERFAMILY RNI-like 172 425 - -
Bisa10g0790 1051 Gene3D Ribonuclease Inhibitor 166 447 IPR032675 -
Bisa10g0790 1051 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 773 818 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0790 765 999 U-box Gene Family AT2G23140 28.692 7.85e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0790 10 17752754 17788472 Bisa10g0790 10 17752754 17788472 ECH