Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0783 ATGGCTTTGATTGTGGATCAACAATCAAACTTCAAGCACTTCTGCAAAATCTGCAAGAAAGGATTTGGGTGTGGGAGAGCTCTGGGAGGGCACATGAGGGCACATGGCATTGGTGACGAGGGCGGGACCATGGACGATGACGATCCGGCAAGTGATTGGGAAGACAAGGTAGGTGGTGGAACTGGAGGCAATGTGCCTCCAACCAATAAACGCATGTATGCCCTGAGGACGAACCCTAATCGGCTAAAGAGTTGCAGGGTCTGTGAGAATTGTGGTAAAGAGTTCTTGTCTTGGAAGTCCTTCCTTGAACATGGCAAGTGCTCCTCCGATGACGTTGACGAGTCCCTCGTCTCTTCCCCGGGTTCCGACGCCGACAACATGCCCAGCCGGAGAGGTTGTGGTTGGTCCAAGAGGAAAAGATCGTTGAGAGCGGCCTCCAAAGTGGGCAGCTTCAACCCTAATTGCTCAGCCAATGAGGAAGAAGACCTCGCTAACTGTTTGATGATGTTGTCCAACGCCACCGTCGATCCTCTCGTCGCTGAGCCAGAGGAGTCCTGTGCCTCGGCTAGCAAAGATGAAGAGCGACGAAACCCTACGACTACGACCTTCATGGCTCCCATGTCTTGTAGAGTTCCTTTAGATAACAAAGCCAAAAGAGTAGCCAAGGGCTTGTTTGAATGCAAAGCATGCAAGAAGGTTTTCAATTCCCACCAAGCCTTGGGTGGCCATAGGGCCAGCCATAAGAAGGTTAAGGGCTGCTTCGCAGCGAGGCTCGACAATAATCTCGACGACGGCCTTAACGGTGGCGCCGACGATGACGTCATAACGCAAGAAGATCAGTTTTTCCCGACGAAATCAAATTCAACCCTTCATTTCGATCAAGGCTCTAATGCCACCACCACATTAACGGCCTCCTGCTCCAAAAGGAAATCAAAAGTTCATGAATGCTCAATATGTCACCGGGTTTTCTCATCAGGGCAAGCATTGGGAGGGCATAAGCGGTGTCATTGGATCACGTCGAATGCCCCGGACACCTCCACATTGGCTAGGTTTCAACAATTTCAAGACCACATGGAACATATAAATAATCAAATTCCAAAATTTGATGATTCGGAGCCGTTCGATTTGAAGCTCGATCTCAACCTTCCAGCTCCATCCCCAGATCTTGCGAGCCCACGTGATGTGACCACAGAAATTTACTTACAGTCATGGGTAGGAGGAGGAATGAAGGAACCCATAGATGATAAAAGTCAAAGCCACAGTCATCGTCACCAGACTCACCACCTCCACCTTCATCATCATGAAATGGACAACGAGAACGATGAAGACTGCAAGAACAATAATTTTGGCAACGCGTACGCTTCCATTATGCAAAACGTGGACGATGAAGCTGACAGTAAGGTGAAGTTAGCAAAACTAAGTGAACTAAAGGACATGAACATAGGAGGGCGTTCTTCGCCATGGTTGCAGGTGGGAATCGGTTCAAGTTCAACAACCGATGTGGGAACTGACCCATAG 1518 0.4921 MALIVDQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDEGGTMDDDDPASDWEDKVGGGTGGNVPPTNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCSSDDVDESLVSSPGSDADNMPSRRGCGWSKRKRSLRAASKVGSFNPNCSANEEEDLANCLMMLSNATVDPLVAEPEESCASASKDEERRNPTTTTFMAPMSCRVPLDNKAKRVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGLNGGADDDVITQEDQFFPTKSNSTLHFDQGSNATTTLTASCSKRKSKVHECSICHRVFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQDHMEHINNQIPKFDDSEPFDLKLDLNLPAPSPDLASPRDVTTEIYLQSWVGGGMKEPIDDKSQSHSHRHQTHHLHLHHHEMDNENDEDCKNNNFGNAYASIMQNVDDEADSKVKLAKLSELKDMNIGGRSSPWLQVGIGSSSTTDVGTDP 505
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0783 505 ProSitePatterns Zinc finger C2H2 type domain signature. 227 247 IPR013087 -
Bisa10g0783 505 SUPERFAMILY beta-beta-alpha zinc fingers 13 105 IPR036236 -
Bisa10g0783 505 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Bisa10g0783 505 MobiDBLite consensus disorder prediction 412 441 - -
Bisa10g0783 505 MobiDBLite consensus disorder prediction 39 71 - -
Bisa10g0783 505 ProSiteProfiles Zinc finger C2H2 type domain profile. 225 252 IPR013087 -
Bisa10g0783 505 Pfam C2H2-type zinc finger 225 249 - -
Bisa10g0783 505 Pfam C2H2-type zinc finger 13 35 - -
Bisa10g0783 505 Pfam C2H2-type zinc finger 313 338 - -
Bisa10g0783 505 SMART c2h2final6 314 336 IPR013087 -
Bisa10g0783 505 SMART c2h2final6 225 247 IPR013087 -
Bisa10g0783 505 SMART c2h2final6 13 35 IPR013087 -
Bisa10g0783 505 ProSitePatterns Zinc finger C2H2 type domain signature. 316 336 IPR013087 -
Bisa10g0783 505 SUPERFAMILY beta-beta-alpha zinc fingers 224 336 IPR036236 -
Bisa10g0783 505 Gene3D Classic Zinc Finger 222 336 - -
Bisa10g0783 505 PANTHER OS02G0659100 PROTEIN 2 498 - -
Bisa10g0783 505 ProSiteProfiles Zinc finger C2H2 type domain profile. 314 336 IPR013087 -
Bisa10g0783 505 Gene3D Classic Zinc Finger 11 107 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa10g0783 Bisa-ChrBisa10 17619510 17621027 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0783 104 378 C2H2 Transcription Factor Family AT1G02040 38.351 7.76e-36 134