Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0758 ATGGCTATGACTAACATTGAGGCATCCACTGATGGTTTAAACTTTTGTAATGATTTGTTAGATAGCCCTCATCATGCGCCACAAGACCCAATAGAGGAGTTGGAATGGTACCCTAGTCTTGGAGACGAACTCATCTCTCTGAATTCCTCTCAATCGAAGTCGGCTCCTCAAAACGACGTCGTCATTACTGAGCATCAGCAGATTGAAAATGAAACAGTGGATCAAGTTCAGCACAAAGGCTTTCCTGTTAAATTTGCCAAAAAGCCGAGAACGAAGAGGGGTTGTAATGGTGAAGCTTTGCGTGAGTTTAGTGTAATGAGGAGAAAATGCAGTCACTGTGAGGCTGAAGAGACGCCTCAATGGAGAGTTGGGCCTTTGGGCCCAAAGACTCCGTGCAACGCGTGCGGTGTGCGTTATAGCTCTGGAAGATTGTTGGCAGAAACATTCAAAGCCCAAAGTCAGAATAAGAACCCATACCAAACCAATATCAATGGCCGCAGCACGAAGACACGAACAAAACACTCAAATGGTGCTTTGAAGACCTCGGAGACGCCTACGAAGCTGACAGATATGCTAGTGGAAGACAGTGGAAACGCCAACGAAGTTGACAGATATGCCAATGGAAGATAG 630 0.4587 MAMTNIEASTDGLNFCNDLLDSPHHAPQDPIEELEWYPSLGDELISLNSSQSKSAPQNDVVITEHQQIENETVDQVQHKGFPVKFAKKPRTKRGCNGEALREFSVMRRKCSHCEAEETPQWRVGPLGPKTPCNACGVRYSSGRLLAETFKAQSQNKNPYQTNINGRSTKTRTKHSNGALKTSETPTKLTDMLVEDSGNANEVDRYANGR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0758 209 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 107 156 - -
Bisa10g0758 209 SMART GATA_3 104 153 IPR000679 GO:0006355|GO:0043565
Bisa10g0758 209 ProSiteProfiles GATA-type zinc finger domain profile. 108 139 IPR000679 GO:0006355|GO:0043565
Bisa10g0758 209 CDD ZnF_GATA 109 139 IPR000679 GO:0006355|GO:0043565
Bisa10g0758 209 Pfam GATA zinc finger 110 143 IPR000679 GO:0006355|GO:0043565
Bisa10g0758 209 MobiDBLite consensus disorder prediction 154 193 - -
Bisa10g0758 209 MobiDBLite consensus disorder prediction 154 209 - -
Bisa10g0758 209 Gene3D - 103 177 IPR013088 GO:0006355|GO:0008270
Bisa10g0758 209 PANTHER GATA TRANSCRIPTION FACTOR 85 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0758 Bisa-ChrBisa10 17129834 17131342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0758 88 183 C2C2-Gata Transcription Factor Family AT3G60530 45.833 1.36e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa10g0758 GATA 2.4e-12 CL0167