Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0756 ATGTACTCCGCCATGGGTCTCCTCCTAAAACCCGTTTTCTTACACTTATTGTCTGGTTCTGTCCACCTAGTTTTGTTAGTAGCGTTTTTAGTCTCTTGGGTGTGGAATAAAATCGCACTGGGAGCCAGAGATGGTTCCAACGGAAAATTGAAGAGCACTCTTCATACGAGGACTCTGTTATTTCCGTTGGGCGCTTCTGTTTTTAATCTTGTTGAGTGTCTAGTGTATTACTTCTATTGGTATAGAAACAGTTGGTCAGACGAAAGACTCGTGACCCTTACGGATTTAGCACTTAAAACTGTTGCTTGGGGTGTCGTTTGTGCTTACTTGCACACAGGGTTCTTCAATTCGGGCGAAAAGAAGTTTCCAATGTTCTTCAGAGCTTGGTGCGCTTTCTACCTTCTTATTTCCTGTTACTCCTTCATACTGGATATCATTTTCTATGAAAAATACGTTTCCTTACCTCTGATTTTTTATGGTGTCTCCTTTTCTGTGATTTTTTTTTTCTGTTACTTGGGGTTCTTTTTGAAAAATGAGGGTAAAGATAGCATTCTTCAAGAACCTCTCTTGGATGGTAATACTGATGTTTGTAATGCGTCAGAGTCATTTAAGACCAAGGGGGCAGAGACTGTTACCCCTTACTCAAATGCTGGAATTTTCAGCTTTCTTACCTTCTCTTGGATGGGTCCTTTGATCGCCGCTGGGAAAAAGAAGACTCTAGACCTCGAGGATGTCCCACAACTAGCTAGTTTTGACAGTGTAGCTGGAGCTTTTCCAAGCTTCAGAAATAAACTTGAGGCAGACTGTGGTGCAATAAACAAGGTGACCACACTTAAGCTGCTTAAGTCATTAATGCTCTCAGCGTGGAAGGAGATTTTTGCAACAGCTATTTTAGCATTTTTAAATACAGTGGCTTCTTGTGTTGGTCCATATCTCATAGACACTTTCGTTCAATATCTCAATGGTAAACGAAAGTTTAAGAATGAGGGATACCTTTTGGTGTCTGCATTTTTTGTTGCAAAGCTTATAGAGTGCCTGTCAGTGAGGCACTGGTCCTTTAAGCTGCAGCAAGTTAGAATTAGGATCCAAGCCCTGCTTGTGACAATCGTCTATAGCAAGGGTTTGACCCTTTCATATCAGTCCAAGCAGGGCCACACTACTGGGGAAAAAATCAATTTCATTACGGTTGATGCTGGAAGAGTTAGCAACTTCAGTTGGTGTATGCATGATCTGTGGCTGGTAGTTCTGCAAGTTGTATTGGCCTTGTTTATTTTGTATAAAAATCTTGGAGTGGCTTCGATTTCAGCTTTTGTTGCAACTATTATTATAATGCTGGCAAATATTCCCCTAGGATCATTGCAAGAGAAGTTTCAAGACAAGTTGATGGAGTCAAAAGATAGAAGAATGAAGGCCACGTCTGAGATTTTAAGGAACATGAAAATTCTCAAACTACAGGGGTGGGAGATGAAGTTTCTGTCTAAGGTTATTGAACTGAGGAAGACAGAGCAAAGTTGGTTAAAGAAATATGTTTATACTTCAGCCATAACCACATTTGTCTTTTGGAGTGCTCCCACCTTTGTATCTGTGGTTACTTTTGGTACTTGCATGCTTCTTGGGATCCCACTTGAATCAGGGAAGATCTTATCTGCACTTGCAACGTTCGGCATACTTCAAGAGTCCATATGTAATCTTCCAGACACAATATCAATGATAACACAAATTAAGGTATCTCTTGACAGGATTGCATCATTCCTTCGTCTTGATGACTTGCAATATGATGTTATAGAGAAGCTTCCAAGGGGTAGTTCTAATAGGGCATTTGAGATAGTTGATGGTAATTTCTCTTGGGATTTATCTTCTCCTAGTACAACATTGAAAGATATAAATCTCACAGTCTTTCATGGCATGAGAGTTGCTGTTTGTGGTACTATTGGCTCGGGCAAGTCTAGTCTACTATCCTGTATTTTGGGAGAAGTGCCAAAGAAATCAGGAATCTTGAGGGTGTGTGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGTGGCAAGATTGAAGAGAATATATTGTTTGGAAAGGAGATGGACAGGGAAAAGTATGAGAAGGTCCTTGAAGCATGCTCCCTGAAGAAGGACCTTGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAACAAAGAATACAACTCGCACGTGCTCTTTACCGAGATGCTGACATATATCTGTTAGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCCCACCTCTTTAAGGACTGTTTACTGGGCCTTTTAAGTTCAAAGACAGTTATTTATGTCACACATCAAGTAGAGTTCTTACATGCTGCTGACCTTATCTTGGTAATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATAATGATTTGCTCAACTTAGGCAGTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTGTACTTGATTCATTGGATGGAGTGGAAGTATCTGATCAAGTAAGTACAGCAGAACAAGAAGTAAATGTCTCCGATGTACAAGTTATGGAAGAAAAAGTGGCAAACAAAGATATGCGAAATGGTAAAACAGATGATGTAGTTGAACCAAAAGGCCAGCTTGTTCAAGAGGAAGAAAGGGAGAAGGGCAGGGTTGGCCTTTCGGTGTATTGGAAATATATAACAACTGCATATGGAGGAGCTCTTGTACCATTTATATTGTTGGCACAGATTCTATTTCAACTTCTTCAAATGGGAAGCGACTATTGGATGGCTTGGGCAACACCCATTTCTTCAGATGTGAAACCACTTGTTGGAGCCTATACGCTTATAATTGTCTATGTTGTCATGGCCATAGGAAGTGCTTTCTGCATTCTTGCTAGAGCAATGCTTCTTTCCACAGCTGGTTATAAGACAGCTACTCTACTCTTCACTAAAATGCATTTGTGCATTTTCCGTGCGCCTATGTCATTTTTTGATGCCACTCCAAGTGGCCGAATCATTAACAGGGCTTCTACGGACCAAAGTGCCGTGGATATAGGCATGCCTTATCAAGTTTTTTCATTTGCCTGCTCTATGATTCATCTCCTGGGAATTATAGCGGTGATGTCTCAGGCTGCATGGCAGGTTCTCATCATCTTCATACCTGTGATATCAATCAGCATTTGGTATCAGCAATACTATTTACCATCAGCCCGAGAACTATCACGGTTAGTTGGAGTATGCGACGCTCCTGTCATTCAACACTTTACTGAAACAATTTCGGGCACAACAACCATTAGATGCTTTGATCAAGAGTCAAGATTTCAGAAAACAAATATGAAACTGACGGATGGATATTCTCGGCCGAAGTTCAATATTGCTGGTGCTATGGGATGGCTTTGCTTCCGCTTGGATATGTTGTCTGCTATTACATTTGCGTTTTCCTTGATATTTTTGATATCTATGCCACAGGGAGACATAGATCCAGGTCTTGCTGGTTTAGCTGTTACTTATGGACTTCATTTGAACGTAATACAAGCTTGGGTGATATGGAGTCTTTGCCACATGGAGAACGAAATTATATCTGTAGAAAGAATACTTCAATACACTTGCCTTCCAAGTGAGCCTCCTCTTGTTATAGAAGGAAACCGACCCAATCCTTCTTGGCCGCCACATGGAGAAGTTGACATTCATGATTTGCAGGTTCGTTATGCCCCACATCTGCCACTTGTGTTGCGTGGTATCACTTGTAAATTTCCTGGAGGATTGAAAACTGGCATAGTTGGGAGAACAGGAAGTGGGAAATCAACTCTAATACTAGCACTTTTCCGGATCATTGAGCCAACTTCTGGGCGAATTACGATTGACGGCATCAACATCTCGTCAATTGGACTACATGATTTGAGGTCTAAACTTAGTATTATTCCTCAAGATCCAACTATGTTCGAAGGGACAGTAAGAAGTAACCTGGATCCATTGGAAGAGTACACAGATGAACAAATTTGGGAGGCTCTGGATAAGGTTCAGCTCGGAGATGAGGTTCAAAAGAAAGAAGGAAAGCTAGACTTTGCAGTTAGTGAGAACGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGAGTGCTACTTAAGAGAAGTAGGGTGTTGGTGCTCGATGAAGCCACTGCCTCAGTTGATACGGCCACAGATAATTTGATTCAGCAAACTCTTAGGCAGCATTTCTCTGACTGTACAGTCATTACCATTGCACATCGAATAACTTCGGTTCTTGACAGTGATATTGTTCTGCTTCTCAATCAAGGACTTATTGAGGAGTGTGACTCTCCGGCTAAATTGCTAGAGGACAAGTCATCTTCTTTTGCCCAACTTGTTGCAGAGTATACCATGCGATCGAAGTCCCCTTTTGAGTAA 4449 0.4122 MYSAMGLLLKPVFLHLLSGSVHLVLLVAFLVSWVWNKIALGARDGSNGKLKSTLHTRTLLFPLGASVFNLVECLVYYFYWYRNSWSDERLVTLTDLALKTVAWGVVCAYLHTGFFNSGEKKFPMFFRAWCAFYLLISCYSFILDIIFYEKYVSLPLIFYGVSFSVIFFFCYLGFFLKNEGKDSILQEPLLDGNTDVCNASESFKTKGAETVTPYSNAGIFSFLTFSWMGPLIAAGKKKTLDLEDVPQLASFDSVAGAFPSFRNKLEADCGAINKVTTLKLLKSLMLSAWKEIFATAILAFLNTVASCVGPYLIDTFVQYLNGKRKFKNEGYLLVSAFFVAKLIECLSVRHWSFKLQQVRIRIQALLVTIVYSKGLTLSYQSKQGHTTGEKINFITVDAGRVSNFSWCMHDLWLVVLQVVLALFILYKNLGVASISAFVATIIIMLANIPLGSLQEKFQDKLMESKDRRMKATSEILRNMKILKLQGWEMKFLSKVIELRKTEQSWLKKYVYTSAITTFVFWSAPTFVSVVTFGTCMLLGIPLESGKILSALATFGILQESICNLPDTISMITQIKVSLDRIASFLRLDDLQYDVIEKLPRGSSNRAFEIVDGNFSWDLSSPSTTLKDINLTVFHGMRVAVCGTIGSGKSSLLSCILGEVPKKSGILRVCGTKAYVAQSPWIQSGKIEENILFGKEMDREKYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQLARALYRDADIYLLDDPFSAVDAHTGSHLFKDCLLGLLSSKTVIYVTHQVEFLHAADLILVMKDGKITQCGKYNDLLNLGSDFMELVGAHKKALSVLDSLDGVEVSDQVSTAEQEVNVSDVQVMEEKVANKDMRNGKTDDVVEPKGQLVQEEEREKGRVGLSVYWKYITTAYGGALVPFILLAQILFQLLQMGSDYWMAWATPISSDVKPLVGAYTLIIVYVVMAIGSAFCILARAMLLSTAGYKTATLLFTKMHLCIFRAPMSFFDATPSGRIINRASTDQSAVDIGMPYQVFSFACSMIHLLGIIAVMSQAAWQVLIIFIPVISISIWYQQYYLPSARELSRLVGVCDAPVIQHFTETISGTTTIRCFDQESRFQKTNMKLTDGYSRPKFNIAGAMGWLCFRLDMLSAITFAFSLIFLISMPQGDIDPGLAGLAVTYGLHLNVIQAWVIWSLCHMENEIISVERILQYTCLPSEPPLVIEGNRPNPSWPPHGEVDIHDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLILALFRIIEPTSGRITIDGINISSIGLHDLRSKLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKVQLGDEVQKKEGKLDFAVSENGENWSMGQRQLVCLGRVLLKRSRVLVLDEATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDIVLLLNQGLIEECDSPAKLLEDKSSSFAQLVAEYTMRSKSPFE 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0756 1482 ProSitePatterns ABC transporters family signature. 732 746 IPR017871 GO:0005524|GO:0016887
Bisa10g0756 1482 SUPERFAMILY ABC transporter transmembrane region 918 1217 IPR036640 GO:0005524|GO:0016020
Bisa10g0756 1482 SUPERFAMILY ABC transporter transmembrane region 281 585 IPR036640 GO:0005524|GO:0016020
Bisa10g0756 1482 CDD ABC_6TM_ABCC_D1 295 581 IPR044746 GO:0140359
Bisa10g0756 1482 CDD ABCC_MRP_domain1 607 807 - -
Bisa10g0756 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 920 1200 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0756 1482 FunFam ABC transporter C family member 5 882 1218 - -
Bisa10g0756 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 829 IPR027417 -
Bisa10g0756 1482 FunFam ABC transporter C family member 3 1220 1472 - -
Bisa10g0756 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0756 1482 Gene3D - 1221 1473 IPR027417 -
Bisa10g0756 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1471 IPR003439 GO:0005524
Bisa10g0756 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 607 830 IPR003439 GO:0005524
Bisa10g0756 1482 FunFam ABC transporter C family member 10 276 589 - -
Bisa10g0756 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1467 IPR027417 -
Bisa10g0756 1482 Pfam ABC transporter 625 759 IPR003439 GO:0005524
Bisa10g0756 1482 Gene3D ABC transporter type 1, transmembrane domain 271 589 IPR036640 GO:0005524|GO:0016020
Bisa10g0756 1482 Gene3D ABC transporter type 1, transmembrane domain 882 1218 IPR036640 GO:0005524|GO:0016020
Bisa10g0756 1482 SMART AAA_5 1263 1448 IPR003593 GO:0016887
Bisa10g0756 1482 SMART AAA_5 634 807 IPR003593 GO:0016887
Bisa10g0756 1482 CDD ABC_6TM_ABCC_D2 918 1212 IPR044726 GO:0140359
Bisa10g0756 1482 Pfam ABC transporter 1254 1402 IPR003439 GO:0005524
Bisa10g0756 1482 Gene3D - 590 841 IPR027417 -
Bisa10g0756 1482 CDD ABCC_MRP_domain2 1235 1455 - -
Bisa10g0756 1482 Pfam ABC transporter transmembrane region 293 559 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0756 1482 Pfam ABC transporter transmembrane region 921 1172 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0756 1482 FunFam ABC transporter C family member 5 592 839 - -
Bisa10g0756 1482 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 214 1471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0756 Bisa-ChrBisa10 17083768 17089436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0756 608 836 Calmodulin-binding Proteins AT2G36910 29.317 8.89e-24 107