Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0755 ATGAAGTGCTTTTACTACTTTAAAGATAAAACCAGGAGCAGAAGACAGAGATCAGCACCTGAGCTGAAAGAGAAAGGGAAATCCCAGTATTCAGGAGCTGATAGAATCTCCAAGTCTTCATTATCTTCAACCTCGACTCGTGGTATACCAGAATTGTATGAAGAAAGGGCTCATAATTTGCGGGTTTTCTCTTTCACAGAGCTGAGGCGCGCAACAAATGATTTCAATAGGCTTTTTAAGATAGGGGAAGGAGGATTTGGGAGTGTATATAAAGGTTCAATTCAGCCCATTGATGGAAATGGGGATCCTACTTTAGTTGCCATCAAAAGCCTGAACAAGGATGGATTACAGGGTCATAAACAATGGATGGCTGAAGTTCAGTTTCTTGGCGTTGTGGAGCACCCAAATCTTGTCAAACTCATTGGATATTGTGCTGTAGATGGTGAAAGAGGGATACAGAGACTTCTTGTATATGAATATATGCCAAACAAAAGCTTAGAACATCATCTTTTTAATAGGGCATATGACCCTCTTCCTTGGAGAACAAGACTTGAGATATTACTTGGAGCAGCTCAAGGATTAGCTTATCTGCATGAAGAATTAGAAGTTCAGGTAATATATCGAGATTTTAAATCATCAAATGTGTTACTAGATGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGTCCAATAGATGGCCGTACTCATGTTTCAACTGCAGTGATGGGCACATTTGGCTATGCTGCTCCAGATTACATTGAGACAGGCCACCTCACTACCAAGAGCGATGTGTGGAGTTTTGGTGTGGTACTGTACGAAGTTCTTACAGGCAGGCGTTCAATGGAGAGAAACAAGCCCAAAATGGAGCAGAAACTTTTGGAATGGGTGAAACAATATCCTGCCGATAGCAAAAGGTTCAGCTTGATCATGGATCCACGGCTCGAAGGACAATATTCTATCAATGAAGCGCGAAAAATTGCCAAGCTTGCTGACCATTGTCTTAGTAAGAGTGCAAAAGAGAGGCCAACAATGAGTCAGGTGGTTGAGAGATTGAAGCAGACAATCGGAAGCTCAGATGAAGAAATTCTTTCAGACAGAAGCATCGATGTATCTGAAGTCAACCCGCCTGACCCTGAGGAAGACAAGTCAGATGAATCAGGTCCCTCAGAATTGTGGAAAAAGAGGATGGCCCATCTTGCAAAGCTCGGTGAGCATGTTGAGAGTGCTAGTAGAAGAAGATTTATGATCCTCCAGAAGGCTAAAGTTCCATCATAG 1290 0.4217 MKCFYYFKDKTRSRRQRSAPELKEKGKSQYSGADRISKSSLSSTSTRGIPELYEERAHNLRVFSFTELRRATNDFNRLFKIGEGGFGSVYKGSIQPIDGNGDPTLVAIKSLNKDGLQGHKQWMAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEYMPNKSLEHHLFNRAYDPLPWRTRLEILLGAAQGLAYLHEELEVQVIYRDFKSSNVLLDENFRPKLSDFGLAREGPIDGRTHVSTAVMGTFGYAAPDYIETGHLTTKSDVWSFGVVLYEVLTGRRSMERNKPKMEQKLLEWVKQYPADSKRFSLIMDPRLEGQYSINEARKIAKLADHCLSKSAKERPTMSQVVERLKQTIGSSDEEILSDRSIDVSEVNPPDPEEDKSDESGPSELWKKRMAHLAKLGEHVESASRRRFMILQKAKVPS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0755 429 MobiDBLite consensus disorder prediction 32 47 - -
Bisa10g0755 429 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Bisa10g0755 429 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Bisa10g0755 429 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Bisa10g0755 429 PANTHER OS01G0588500 PROTEIN-RELATED 36 358 - -
Bisa10g0755 429 CDD STKc_IRAK 81 358 - -
Bisa10g0755 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa10g0755 429 MobiDBLite consensus disorder prediction 11 31 - -
Bisa10g0755 429 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Bisa10g0755 429 Gene3D Transferase(Phosphotransferase) domain 1 161 376 - -
Bisa10g0755 429 MobiDBLite consensus disorder prediction 369 397 - -
Bisa10g0755 429 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0755 429 MobiDBLite consensus disorder prediction 11 47 - -
Bisa10g0755 429 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 161 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0755 Bisa-ChrBisa10 17066251 17070315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0755 1 390 Glycoside Hydrolase AT3G07070 42.260 1.44e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa10g0755 PK_Tyr_Ser-Thr 1.8e-46 CL0016