Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0723 ATGGGTAGTACCGTCAACAACCCAAACAATCCATGGACGCCAAATGCTGTAATCAGAGATTGCTCTCAAGGAATCTGCAGCATCTATTGCCCCCAATGGTGCTACATCATCTACCCTCCTCCTCCTCCTTCTTCCGTCACCGTCGGCAATGATGACGACACTTCAGCTTTCCAACTCTCTCCTCTTATAGTCGCTCTCATCGGCATCTTAGCCTGCGCTTTCGTCTTAATCACCTACTACACCATCATCACGAGATTCTGCAAGCGCCGACGCCAAATCCACGAAAACGGCGATTCCTTCAACTTAAACGACGACGAATTGGCGCGAGCTCCTTCGTCGTCTAACTCTGGATTAGACGAGTCGCTCATCAGATCTATCACAGTCTGTAAGTACAAGAAAGGCGATGGGTTAGTGGAAGGTACTGATTGCTCGGTGTGTTTGAGCGAGTTTCAAGAGCGCGAGAGCTTGAGATTATTGCCTAAATGCAACCACGCATTTCATCTTCCTTGCATCGACACATGGCTGAAATCTCATTCGAGTTGTCCTCTGTGCCGATCCAACATTATCGTCTCCACAGCTTCTTCCAGTGGTTTACCAAATGAGAGAGATACACATACACCGATATCATCGCAGGAAGCAACACAACCGAGTGTGAATATCTCTGCCTTGGAGTACCATCGCACGAACGATACTGTCATAGTGATTCAGAATTCGGAACAAGAAATTCAGGTCGGTTTTGAAGCTGTTAATGGAGGGAATTTGGAACAGAGAAATGCGAGTGAATTGAATTCCTGTTCGAGTCAAGGAAGATTGTCAGTTGCTGATATATTGAGAGCTACTGAAGACGATGACGAAGTTCAGATAGGAATTGGAAGAGAACACGAGAAGAGGGAAGTGCTATCGGAATGCTGA 912 0.466 MGSTVNNPNNPWTPNAVIRDCSQGICSIYCPQWCYIIYPPPPPSSVTVGNDDDTSAFQLSPLIVALIGILACAFVLITYYTIITRFCKRRRQIHENGDSFNLNDDELARAPSSSNSGLDESLIRSITVCKYKKGDGLVEGTDCSVCLSEFQERESLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRSNIIVSTASSSGLPNERDTHTPISSQEATQPSVNISALEYHRTNDTVIVIQNSEQEIQVGFEAVNGGNLEQRNASELNSCSSQGRLSVADILRATEDDDEVQIGIGREHEKREVLSEC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0723 303 CDD RING-H2_EL5-like 142 185 - -
Bisa10g0723 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 190 IPR013083 -
Bisa10g0723 303 FunFam RING-H2 finger protein ATL54 118 191 - -
Bisa10g0723 303 SUPERFAMILY RING/U-box 137 191 - -
Bisa10g0723 303 Pfam Ring finger domain 142 185 IPR001841 -
Bisa10g0723 303 PANTHER RING-H2 FINGER PROTEIN ATL16 51 263 IPR044600 GO:0016567|GO:0016740
Bisa10g0723 303 MobiDBLite consensus disorder prediction 195 214 - -
Bisa10g0723 303 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Bisa10g0723 303 SMART ring_2 143 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0723 Bisa-ChrBisa10 16413290 16414201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0723 1 298 C3H Transcription Factor Family AT3G03550 46.273 4.17e-78 240