Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0720 ATGCTTTGGGAGGATTTATCCAACATGCTCAGTGCTACTTTTTCAAGCCTAACGTTAGGTCCACCCTGCATGTTGGAGCATGTAATGCTACCGGTAGAAATCATCTTTTCGTCAGTCTTGATAATCCACCTTCTGAAAAAGGGTGTGGACATGATCAAGAAGCATAAGAACAACAATGTCTCAGATGGAAAAAGCACAGAGATTAAATTCAAACCCACTGTAGTAAAACTGGGTCTGGCTTTCAAAACCAGCATAATCTGCTCCACTTTGCTCTTGGCTGTTCAAGTCTTACTTCTTCTAACGACAGTGAATGGTGAGACTGAATGCAACTCGAGACTCGAGTCTTTAACGTCAGAGATACTTCTGGTTCTCTCATGGGCAATCACACTCATAGCGATATGGAACATGCCAAGGTCATACACTAAGTTCCCTTGGATGCTGAGATCATGGTGGCTTTGCAGCTTCTTCCTGTGCATTGTAAGCCTAGTGTTTCACAGCCATCTCAGTGTGAGAAAAGAGGGACAGCTTGGTGTGAGGGAGTATGCAGATTTTCTTGGCCTTCTTGCCTCGACATTTTTATTGGGGATCTCAATAAGAGGAAATACAGGGATTGTGTCGATTCCCAGAAATGGCCTCTCAGAGCCACTCCTAAGTGAGAAAGACTCCTCCAAAAGGGAATCCTTATATGGGAATTCCACTTTCCTTCAACTCATCACCTTCTCATGGCTCAACCCTTTGTTCGTAGTAGGGTACAAGAAGCCGCTCGAGCAGAATGATATTCCTGATGTTGACGTTAAAGACTCTGCTGAATTCCTGTCCAATTCGTTCGATGAGAGCTTGAGGAAAGTCAAGGAGAGAGATGGGACTGCAAACACATATTCTATCTACAAGGCGATCTACTTGTTTGGTAGGAACAAGGCCGCGATCAATGCTTGTTTTGCGGTGGTGAACGCTGCAGCATCATATGTTGGCCCCTATTTGATCACTGACTTTGTGAATTTCTTAGGGGAAAAGCGAAGCCGAGGGTTGAAGCAAGGGTTCATGTTGTCACTGGCATTCTTACTTGCCAAAATGGTTGAGACCATAGCTCAGAGACAATGGATTTTTGGTGCCCGCCAGTTAGGCCTTCGCCTTAGAGCCTCATTGATATCTCGTATTTATAAGAAGGGCTTGATTTTGTCAAGTAGATCGCGCCAAAGTCATACCGGTGGTGAGATTATGAACTATATGAGTGTGGATGTGCAGAGAATAACAGATTTCATGTATTACATAAACGTAATATGGATGCTTCCTGTGCAAGTAACCCTAGCAATCTACATTTTGCACACGAATCTTGGTCTAGGCTCGTTGGCTGCATTAGTTGCTACATTGACTGTTATGACACTGAACATTCCTCTCACGAGAATACAGAAAAGATACCAATGTAGGATCATGGACGCTAAGGACGCCAGGATGAAGGCCACGTCAGAAGTCCTCAAAAACATGAAGACGCTGAAACTTCAAGCGTGGGATAGCGAATTCCTGCAAAGGATACAAGATCTGAGGGCCACGGAGTATGCTTGGTTATGGAAATCACTGAAACAATCAGTATTTTCTGCTTTCATCTTTTGGGCATCACCCACATTTATATCTGTGATAACCTTCTGGGCATGTATCTGGATGGGGATTGAACTAACAGCAGGAAGAGTGTTATCTGCATTCGCCACGTTTCGGATGTTACAAGACCCTATATTCAGCTTGCCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCAGTGGACAGGATTGCTTCTTTTCTTGGGGAAGAAGAAATTCAACATGATGCCATTGAGCATGTTGAGAGAGACCAAACAGAGTTTGATGTAGTCATTGAGAACGGAAGGTTCAGTTGGGATTCTGAGTCAAGCATTCCAACACTTGATGGCATAGAGTTAAGAGTCAAAAGAGGAATGAAGGTGGCAATTTGTGGGACTGTAGGATCTGGAAAGTCTAGTTTGCTTTCAAGTATTGTAGGGGAAATGTATAAACAATGTGGGACTGTTAAGGTCAGTGGAACAAAAGGTTATGTTCCACAGTCACCATGGATACTCACTGGAAATATAAGGGAGAATATTACCTTTGGAAAAGAGCATAACAATGTCATGTATAACAAGACTATTGAAGCATGTGCATTGAAGAAGGACTTCGAGCTATTCTCATGTGGTGACCTCACAGAGATTGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGGATACAGATAGCAAGAGCGGTTTATCAGGATGCTGACTTGTATCTCTTTGATGACCCTTTCAGTGCTGTTGATGCTCATACAGGAAGCCACCTCTTCAAGGAGTGCCTTATGGGAATTCTCAGAGAAAAAACTATACTTTATGTGACCCACCAAGTCGAGTTTCTTCCAGCAGCAGATCTTATTCTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAAAATTCGAACAACTTCTACAGCAAAACATAGGATTTGAGGTTCTAGTAGGAGCTCATAGCCAAGCCATAGAGTCAGTTGTCATGGTGGAAAACACAAGCAGAACAACAACCCTAAATCTGACACCCGATACCGAATCGAACGCCGATTCCAAGTCGAACGCAGACACCGAGCAAGGTACTAATCCCCCAGAGATCAATGAGAAAGAAGGAAAGCTTGTGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAAAGAAGTTTACTGGTCTTACTTGACCACTGTGAAAGGTGGAGCCTTAGTTCCAGTAATAATTTTGGCTCAGTCTTCATTCCAAGTGCTTCAAGTTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTACATCCAGTGAGGCCGAACCTGCATTTCAAATGAACTTCATACTGCTTGTTTACATGATACTCTCTGTGGGGAGTGCATTGTGTGTGCTGCTGAGAGCCGTGTTAGTGGCGAAATCTGGACTCTGGACTGCACAGAAACTGTTTATCAACATGTTGCATAGGGTGCTCAGGGCACCCATGTCATTCTTTGATTCAACTCCAACTGGAAGAATCTTGAATAGGGCCTCTACAGATCAAAGTGTGCTAGACCTGGAAATGGCAACAAAATTAGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACTATTACAGTAATGTCACAGGTGGCATGGCAAGTATTTCTCATCTTCATTCCAGTCACAGCCATCTGCATATGGTATCAACGATATTATACACCAACAGCAAGAGAATTGGCTCGCATAGCACAAATACAGATAGCTCCAATTCTGCATCATTTTTCGGAGTCACTCGCAGGAGCAGCATCGATCAGAGCCTTTGATCAAGAAGGCCGATTCGTGTACTCCAATCTTGAGCTTGTGGACAACCACTCCAGGCCATGGTTTCATAACGTCTCTGCCATGGAATGGCTTTCTTTCAGACTCAATTTACTCTCCAACTTTGTTTTTGCCTTCTCACTGGTTTTGTTAGTGGTCCTCCCCGAAGGAATCATCAACCCAAGCATTGCAGGACTGGCAGTAACATATGGGATCAATTTGAATGTGCTTCAAGCACAAATCATATGGAACATATGCAATGCAGAAAATAAGATGATATCTGTTGAAAGAATTCTTCAGTACTCAAATCTCCCAAGTGAGGCGGCTCTTGTGATTCAAGATTCCAGGCCTCCAAACAACTGGCCTCATACTGGAACCATATGCTTCAAAAACTTGCAGATACGTTATGCGGATCACCTTCCGTGCGTTCTGAAGGACATCAGTTGCACATTCCCTGGGAGGAAGAAGATCGGCGTGGTGGGACGAACTGGGAGTGGAAAATCGACGCTGATTCAGGCCATCTTCAGGATCATCGAACCCAGAGAGGGAAGCATTGTGATTGATGATTTGGACATTTGCAAGATTGGCCTCCATGACTTGAGGATGAGGCTCAGCATCATCCCACAGGATCCAGCCTTGTTTGAAGGCACCATAAGAGGAAACCTCGACCCACTCCACCAATACTGTGACAGACAACTCTGGGAGGCTCTAGATAAATGTCAGCTTGGTCAGATAGTGAGAACAAAGGAAGAGAAATTGGATTCCCCAGTGGTTGAAAATGGAGAAAACTGGAGCGCAGGACAAAGGCAATTAGTTTGCCTTGGAAGAGCCTTACTGAAGAAAAGTAGCATACTTGTGCTGGATGAAGCTACGGCGTCGGTGGATTCCGCCACCGATGGAGTCATACAGAAAATCATTTCTCAAGAATTCAAAGATCGCACGGTCGTCACAATAGCTCATCGAATCCACACCGTCATCCATAGCGATTTGGTTTTGGTCCTCAGCGATGGGAGAATCGCAGAGTTTGATTCGCCATCGAAGTTACTTGAAAGAGAAGATTCCTTCTTCTCTAAACTCATAAGAGAATACTCAAGGAGATCAAAGTTTCAATAG 4476 0.4388 MLWEDLSNMLSATFSSLTLGPPCMLEHVMLPVEIIFSSVLIIHLLKKGVDMIKKHKNNNVSDGKSTEIKFKPTVVKLGLAFKTSIICSTLLLAVQVLLLLTTVNGETECNSRLESLTSEILLVLSWAITLIAIWNMPRSYTKFPWMLRSWWLCSFFLCIVSLVFHSHLSVRKEGQLGVREYADFLGLLASTFLLGISIRGNTGIVSIPRNGLSEPLLSEKDSSKRESLYGNSTFLQLITFSWLNPLFVVGYKKPLEQNDIPDVDVKDSAEFLSNSFDESLRKVKERDGTANTYSIYKAIYLFGRNKAAINACFAVVNAAASYVGPYLITDFVNFLGEKRSRGLKQGFMLSLAFLLAKMVETIAQRQWIFGARQLGLRLRASLISRIYKKGLILSSRSRQSHTGGEIMNYMSVDVQRITDFMYYINVIWMLPVQVTLAIYILHTNLGLGSLAALVATLTVMTLNIPLTRIQKRYQCRIMDAKDARMKATSEVLKNMKTLKLQAWDSEFLQRIQDLRATEYAWLWKSLKQSVFSAFIFWASPTFISVITFWACIWMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLGEEEIQHDAIEHVERDQTEFDVVIENGRFSWDSESSIPTLDGIELRVKRGMKVAICGTVGSGKSSLLSSIVGEMYKQCGTVKVSGTKGYVPQSPWILTGNIRENITFGKEHNNVMYNKTIEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADLYLFDDPFSAVDAHTGSHLFKECLMGILREKTILYVTHQVEFLPAADLILVMQNGRIAQAGKFEQLLQQNIGFEVLVGAHSQAIESVVMVENTSRTTTLNLTPDTESNADSKSNADTEQGTNPPEINEKEGKLVQDEERERGSISKEVYWSYLTTVKGGALVPVIILAQSSFQVLQVASNYWMAWVCPTSSEAEPAFQMNFILLVYMILSVGSALCVLLRAVLVAKSGLWTAQKLFINMLHRVLRAPMSFFDSTPTGRILNRASTDQSVLDLEMATKLGWCAFSIIQILGTITVMSQVAWQVFLIFIPVTAICIWYQRYYTPTARELARIAQIQIAPILHHFSESLAGAASIRAFDQEGRFVYSNLELVDNHSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQAQIIWNICNAENKMISVERILQYSNLPSEAALVIQDSRPPNNWPHTGTICFKNLQIRYADHLPCVLKDISCTFPGRKKIGVVGRTGSGKSTLIQAIFRIIEPREGSIVIDDLDICKIGLHDLRMRLSIIPQDPALFEGTIRGNLDPLHQYCDRQLWEALDKCQLGQIVRTKEEKLDSPVVENGENWSAGQRQLVCLGRALLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIHSDLVLVLSDGRIAEFDSPSKLLEREDSFFSKLIREYSRRSKFQ 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0720 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1478 IPR027417 -
Bisa10g0720 1491 Gene3D - 621 852 IPR027417 -
Bisa10g0720 1491 MobiDBLite consensus disorder prediction 862 889 - -
Bisa10g0720 1491 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Bisa10g0720 1491 CDD ABCC_MRP_domain1 623 823 - -
Bisa10g0720 1491 CDD ABCC_MRP_domain2 1246 1466 - -
Bisa10g0720 1491 Gene3D - 1230 1484 IPR027417 -
Bisa10g0720 1491 CDD ABC_6TM_ABCC_D1 309 597 IPR044746 GO:0140359
Bisa10g0720 1491 SUPERFAMILY ABC transporter transmembrane region 930 1228 IPR036640 GO:0005524|GO:0016020
Bisa10g0720 1491 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524|GO:0016887
Bisa10g0720 1491 Gene3D ABC transporter type 1, transmembrane domain 282 609 IPR036640 GO:0005524|GO:0016020
Bisa10g0720 1491 Pfam ABC transporter transmembrane region 940 1175 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0720 1491 Pfam ABC transporter transmembrane region 310 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0720 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0720 1491 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Bisa10g0720 1491 FunFam ABC transporter C family member 5 608 855 - -
Bisa10g0720 1491 FunFam ABC transporter C family member 3 1231 1483 - -
Bisa10g0720 1491 FunFam ABC transporter C family member 10 291 605 - -
Bisa10g0720 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Bisa10g0720 1491 CDD ABC_6TM_ABCC_D2 929 1223 IPR044726 GO:0140359
Bisa10g0720 1491 MobiDBLite consensus disorder prediction 890 906 - -
Bisa10g0720 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 839 IPR027417 -
Bisa10g0720 1491 MobiDBLite consensus disorder prediction 862 906 - -
Bisa10g0720 1491 Gene3D ABC transporter type 1, transmembrane domain 893 1229 IPR036640 GO:0005524|GO:0016020
Bisa10g0720 1491 SMART AAA_5 1274 1459 IPR003593 GO:0016887
Bisa10g0720 1491 SMART AAA_5 650 823 IPR003593 GO:0016887
Bisa10g0720 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0720 1491 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1484 - -
Bisa10g0720 1491 SUPERFAMILY ABC transporter transmembrane region 306 597 IPR036640 GO:0005524|GO:0016020
Bisa10g0720 1491 FunFam ABC transporter C family member 5 892 1229 - -
Bisa10g0720 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1250 1482 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0720 Bisa-ChrBisa10 16203338 16216908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0720 617 837 Calmodulin-binding Proteins AT2G36910 30.802 1.01e-23 107