Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0710 ATGGATAGTGAAAGAGGAACACTCAGTCATAGTTCTGGTAACAAAAATGGTCCTCCACTTGAAATCAATGTTCTGGTTGTTGATGACGATGCTACAATGCGTGAGAAAACATTGGGAATACTCACTTCGTTGAATTACAAAGGTATCAAGGACCCTTTGGTTGCGTTGGAAAGGCTTAAAGAGAAAGAAGGCCATTTCGACCTCATTGTGATTGACCTTCACTTCCCTGATTTTGATGGATTCAAACTCAAGCACACACTTGATCAACACTTCTCATTACCTGTCATCATGATTTCAGAGGAGAAGAATGAGGAAGTGATAGAGGAAGCCTTGAGGAGTGGTGTAGTGCGATACATAGTGAAACCAGCCACAGCAAATGACTTCAAAGGTATTTGGCAGTTTGCAGTATCTGCAATGAAAGGCAAGAAGCCAAATGGTGTAATGTTAGAGAGACTACAACATTCTGCTGAACCCTCAAACTCATCATCAACGATGTTGAGAAGAGAATTGGGCAAAAGGTTACTTAAAAGAAAGGACTACGTGGTGAGGACCCCAATGAATAATAATAATAATAATAATAATACTGCATCGGAGGATAATAATTGTAAGCCATCATCGTCTCTTACTAAGAAGACCAAGGTTGTTTGGACTAATGATCTTCAAACTCGGTTCTTAGAAGCCATCAATATCATTGGCTTACACAATGCAGTTCCCAAAAAGATTCTTCAAGTAATGAAAACGCCAGGGCTAACTAGGGACAATGTGGCAAGTCACTTGCAGAAATATCGAATTTTTCTAAAGCGAGTTGCAAGAATGTTCGCCATGGTGATGAACAACGCAAGTAAGAAGAATATCATCCTAACAAATCTGGAATCCAAATACCCTTCGCTGATGTTGAAGAACATTCAAGAGGAATTCGTAAGAATCGTAAGACACTGCAAAATGAGAAGTACTGCTTCTTCAAATCCTTCATCATCATCCTTCAACAATCTTCCTTCTTTTTCTTACGAGCCATCATTGTTCAACGCAAACCCTAGAAATGCAAAAGTTTATAACCCTTACGGATCATCGAATACTTATAATAATTACACCAATGGTTTCAATGGTGGATTTGGGTTAACAGCTTTTGATGGGATGAATCAGATGGAGCCTGTTGGAAATAATGGTAATTTTGATTATGGGTATAATTATAGTTCCATCATGATGAATGACTCAAATCATAGTGAGGGTCATAGTGCAACTATGGAGAATATTTTGGTGCAACCTTTTTATGAGCAGCAACAGCAACGGCAACAGCGGCAAAATCAGATTTCTAATGAAGATTTCTATCAGACTTATGCAATTAGAGATTACAATGATGCTTTACATGTAATGTCTCATTGCTCACCCTTGAGTGGAATTGATTGTAGTGACAACATCATGGAAGATGTTCTTAGCGAATTCAACAATCAGCTAGAGCAAGTGGCTGGCAAAGATATTAATCCAACTGAGGACTCCAACAAGTACTTTCCAACATTTGTCGAAGTCTCTGATGAGGCAAGATTTGGCAGGTGGCTTCATGGAGTCTTTGTTCAATAA 1578 0.3878 MDSERGTLSHSSGNKNGPPLEINVLVVDDDATMREKTLGILTSLNYKGIKDPLVALERLKEKEGHFDLIVIDLHFPDFDGFKLKHTLDQHFSLPVIMISEEKNEEVIEEALRSGVVRYIVKPATANDFKGIWQFAVSAMKGKKPNGVMLERLQHSAEPSNSSSTMLRRELGKRLLKRKDYVVRTPMNNNNNNNNTASEDNNCKPSSSLTKKTKVVWTNDLQTRFLEAINIIGLHNAVPKKILQVMKTPGLTRDNVASHLQKYRIFLKRVARMFAMVMNNASKKNIILTNLESKYPSLMLKNIQEEFVRIVRHCKMRSTASSNPSSSSFNNLPSFSYEPSLFNANPRNAKVYNPYGSSNTYNNYTNGFNGGFGLTAFDGMNQMEPVGNNGNFDYGYNYSSIMMNDSNHSEGHSATMENILVQPFYEQQQQRQQRQNQISNEDFYQTYAIRDYNDALHVMSHCSPLSGIDCSDNIMEDVLSEFNNQLEQVAGKDINPTEDSNKYFPTFVEVSDEARFGRWLHGVFVQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0710 525 FunFam Two-component response regulator 207 270 - -
Bisa10g0710 525 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Bisa10g0710 525 Pfam Response regulator receiver domain 24 127 IPR001789 GO:0000160
Bisa10g0710 525 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Bisa10g0710 525 ProSiteProfiles Response regulatory domain profile. 23 136 IPR001789 GO:0000160
Bisa10g0710 525 Pfam Myb-like DNA-binding domain 214 263 IPR001005 -
Bisa10g0710 525 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 267 IPR017930 -
Bisa10g0710 525 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 172 440 IPR044841 GO:0003700|GO:0006355
Bisa10g0710 525 SMART REC_2 22 132 IPR001789 GO:0000160
Bisa10g0710 525 MobiDBLite consensus disorder prediction 184 207 - -
Bisa10g0710 525 SUPERFAMILY CheY-like 22 151 IPR011006 -
Bisa10g0710 525 Gene3D - 20 143 - -
Bisa10g0710 525 Gene3D - 207 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0710 Bisa-ChrBisa10 16029242 16045070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0710 20 294 Response Regulator Gene Family AT5G07210 36.364 2.71e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa10g0710 Response_reg 9.5e-18 CL0304