Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0685 ATGGGTGACATACGCCGGAGAAGCAATAGTAGACAGAGTCATCCTCCGCCGCCGTCACAGGTAACGCCGCAGTCTGAAGTCGCGGCCAATCGTTTGGTGCATCCTGCATCTACCCCTTACACTTCACAATACCGCAACTCAAATCCTTCCCCCTATTTTCAGTGCCCAGGTTACTATCCCGTTGCGCTACAAGCTATGCCGGTGCCTTTGCTCGCTCTAATCGATCACCACCCCCGTATGGGGTCTCGTCCACACATGGACCCATCATGGAGGGGTGGGCCTGTTATACCTCCCCGTGCACTATATGTAGAGCATCAGAAGGCAGTTACCATAAGGACTGATATTGCTGTCAGAAAGGAGACTCTAAGGATGGAACCAGATGATGAAAATCCTGGGCACTTCCTCGTGGCATTCGTATTTGATGCCACCGTTGCTGGGAGCATCTCCATAATTTTTTTTGCGAAAGAATATGACAACGGCATCCTTGGCCCAACGAAGGGATATGTTCTTCCACATGTGACTCTAAGTATCGGGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGTTGGAACTGGTATTGACTTATCATTCTTTGAGGAGTCAGACTTATTGAAAGTGGCTGACATGGATGTCTACCCTCTAGCAGTTAGGCTAGAAGCATCCTATGATGAACAAGATGGACCAAATGATTGTCTAACACCTGAAAGCATAGTCTCTCGGATAATTCAAGCAGTGTTTGAGGAGGAGGAAGGAGAATTCCGGGTGAAGGTAGTCAAGGAGATTTTGTGGGTAAATGAACTGAGGTATGAACTGGAAGAGATATACGGCATTGGAGATTCTGTGGAGAGTAACTTGGATGCAGATGATTCTGGAAATAGGTGTGTCATCTGCCTCTCAAAGCCACGGGACACAGCTGTCCGTCCCTGCCGACACATGTGCATGTGTAGCGAATGTGCAGAGAAGTTGATGTCTCAGAGTCACACGAGTAGATGCCCAATCTGCAGACAGCCAGTGGAGAGGCTTTTGGCGATAGAGGTGAGTACTGGTAACGGCACCAAGGAATGA 1065 0.4892 MGDIRRRSNSRQSHPPPPSQVTPQSEVAANRLVHPASTPYTSQYRNSNPSPYFQCPGYYPVALQAMPVPLLALIDHHPRMGSRPHMDPSWRGGPVIPPRALYVEHQKAVTIRTDIAVRKETLRMEPDDENPGHFLVAFVFDATVAGSISIIFFAKEYDNGILGPTKGYVLPHVTLSIGQGLGQKFRQPVGTGIDLSFFEESDLLKVADMDVYPLAVRLEASYDEQDGPNDCLTPESIVSRIIQAVFEEEEGEFRVKVVKEILWVNELRYELEEIYGIGDSVESNLDADDSGNRCVICLSKPRDTAVRPCRHMCMCSECAEKLMSQSHTSRCPICRQPVERLLAIEVSTGNGTKE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0685 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 344 IPR013083 -
Bisa10g0685 354 SUPERFAMILY RING/U-box 293 340 - -
Bisa10g0685 354 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Bisa10g0685 354 PANTHER MAHOGUNIN 39 346 IPR045194 GO:0061630
Bisa10g0685 354 MobiDBLite consensus disorder prediction 1 25 - -
Bisa10g0685 354 SMART ring_2 294 334 IPR001841 -
Bisa10g0685 354 FunFam probable E3 ubiquitin-protein ligase LOG2 278 345 - -
Bisa10g0685 354 Pfam Zinc finger, C3HC4 type (RING finger) 292 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0685 Bisa-ChrBisa10 15358532 15361727 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0685 102 312 C3H Transcription Factor Family AT3G09770 53.812 6.49e-75 233