Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0657 ATGCTAATACAGAGTTCTCTTCCTAGTTCAATTGAAGCTGCTCTATTTTTTGTATCTGATAATGGGAAAGAAGATGTTCTATGTGACTGGATGCCTAGTGCTGAAACTTGGCAGGTGTGCCTGAAATGCAATAGATATCCTCTTGACTGCTGCAGAAAAGCTGAAGCAATGCAAGACGATAGAAGGAATGCTGATGATCCTTGCAGCTCAAACTGTCTAAGTAGCTTAGGTCGGCCATCAACTGCTAGTACTATGACTGAAAATTCTGTGCCTAAGATGGTATACAGGAGAAAGAAGCTACGGAAGAAATCAACTGAACCGCTTTTAAAGATAGATCCTATGACTCTGCTGACAAGTGCCAATTCCCCTTCAGTCATCAGCTCCTATGCTCATTTATCATCAGCCGAGGATAAACCAACTATTTCTCAAGTTAAGCATGAAATTGAAATGGTTAAAGATCCTGTTGTGCCCGCTGTCTTATGTGAAGGAGCAATAGGGAATAGCATGCATAAAAATTTAGGTATTGACAGTGTTAACGATAGTTGCTCCTCATCAAAATCAAATATGGAAATTGTGTCGGATTCTGTAGAAACTGAAATGGATGAAAATGGTGAATGCTCCTCATCTAGTGCAGTAGTTGTTGCAGATGTCTTGAGGGAAGACCTATCAGCAAGGGATTTCTGCATCAAAATTTTGAGAAGCCATGGACTTCTTGGAGGAGATTCTCATGCTGACAATGTGGCCTCTGTCGGAGAGGCTGCTACCACTGGTAATAGTTGCTGTTCGCGGTCATGCAAAATATGTGGTCACTTAGATGGCTCATTGAACATGCTAATATGCGATCATTGTGAAGAGGCATACCATCCATCTTGCTGCATTCCACGATTGAAGAAAGTACCAGTTGATGAATGGTATTGTCATTCATGTCTAAAAAGGAAGCAAAAGATTCTTAAGGAGACAATTATTAGAAGTTCAACAGCTGTCAACAGTGAAATGGACATATGTAGAACTACCTCAGTTAGTGGTGGATTAAATCCTATACTGTTGATGTTGAATGACTCCGAGCCAAATAGAACTGGTGTAAGGGTTGGTAAAGGTTTTCAAGCTGAAGTTCCTGATTGGTCAGGTCCAATAAGAAGGTAA 1143 0.4068 MLIQSSLPSSIEAALFFVSDNGKEDVLCDWMPSAETWQVCLKCNRYPLDCCRKAEAMQDDRRNADDPCSSNCLSSLGRPSTASTMTENSVPKMVYRRKKLRKKSTEPLLKIDPMTLLTSANSPSVISSYAHLSSAEDKPTISQVKHEIEMVKDPVVPAVLCEGAIGNSMHKNLGIDSVNDSCSSSKSNMEIVSDSVETEMDENGECSSSSAVVVADVLREDLSARDFCIKILRSHGLLGGDSHADNVASVGEAATTGNSCCSRSCKICGHLDGSLNMLICDHCEEAYHPSCCIPRLKKVPVDEWYCHSCLKRKQKILKETIIRSSTAVNSEMDICRTTSVSGGLNPILLMLNDSEPNRTGVRVGKGFQAEVPDWSGPIRR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0657 380 SUPERFAMILY FYVE/PHD zinc finger 259 314 IPR011011 -
Bisa10g0657 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 323 IPR013083 -
Bisa10g0657 380 ProSiteProfiles Zinc finger PHD-type profile. 262 312 IPR019787 -
Bisa10g0657 380 FunFam RING/FYVE/PHD zinc finger superfamily protein 251 331 - -
Bisa10g0657 380 PANTHER TRANSCRIPTION INTERMEDIARY FACTOR 191 315 - -
Bisa10g0657 380 ProSitePatterns Zinc finger PHD-type signature. 265 309 IPR019786 -
Bisa10g0657 380 Pfam PHD-finger 265 310 IPR019787 -
Bisa10g0657 380 SMART PHD_3 264 310 IPR001965 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0657 265 314 C2H2 Transcription Factor Family AT3G01460 40.000 1.95e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa10g0657 PHD 4.4e-09 CL0390