Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0649 ATGGAAGAAGCAGATTTCCTCAGAAAACCCGTGAAGAGTTCTTTCTTCAAAGTCCTGATTGGGGATTATGCTACTAAATTGTTAATCCCTGTGCTGTTTGTGCATAGATTTCGTAGCGTTGTACCAGAGAGAGTAACACTAATTCGGGCTTCTTCGAATAAATCTTGGAGTACTGATATTGAGGAAGAGGATGATAAAAAACTGTATCTCAAAAGGGGTTGGAAGAAATTTGTGGAAGATAATGGTTTAGAATTTGGGGATTTTATAATTTTCAAATTTCATGGGAACTCAACATTTAAGGTTAAGATTTTTGGAAAATCTGCCTGCGAGAAGGAGGTTCTGGATCTGATGGTCACTGGTCAGAAATATTATTACTCTGATAATGCTGGTATTCAAAATCAGAAACAGATAAAAATGCCAATCCCTCAAGAAAATCAGAAGCAAAGAAACCCTGATTGTGAAGAAAGAAAGGCATCTAAGAAAGAAGGTGAAGAAGAAAGCAATGAGGTTATTGTTATTGAACCTGATGGGCTTCTCAGGAAAACCGGCATGCATAAAAGGCCAATGCAGAAAGCATTCAATGACAACAGCAAATTGGATTCCAAGCATCCTTCATTCAGAGTTCTTATGAAGCAAGCCTACACAGAGAAAGGCAGTCTGTGCATCCCCACAGAGTTTTACCAGCGACATATGAGAAAGGAGAGACAAAGAATAGAGATAGAGACATCAAAAGGATCGTGGACTGTGACATTAGTTCCCAGTAAAAGGAGAAACGGTGCGTATGGGAGATTCAGTGCGGGTTGGACAGAATGCGCCAGACGCAATTGTTTTAAGACGGGAGAAACTCTTCTTTTTCAGATGGTTTGGTCAAATAATTGTCCTAAGTTCATAGTTCACACACTCAGGAAATAA 912 0.3925 MEEADFLRKPVKSSFFKVLIGDYATKLLIPVLFVHRFRSVVPERVTLIRASSNKSWSTDIEEEDDKKLYLKRGWKKFVEDNGLEFGDFIIFKFHGNSTFKVKIFGKSACEKEVLDLMVTGQKYYYSDNAGIQNQKQIKMPIPQENQKQRNPDCEERKASKKEGEEESNEVIVIEPDGLLRKTGMHKRPMQKAFNDNSKLDSKHPSFRVLMKQAYTEKGSLCIPTEFYQRHMRKERQRIEIETSKGSWTVTLVPSKRRNGAYGRFSAGWTECARRNCFKTGETLLFQMVWSNNCPKFIVHTLRK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0649 303 MobiDBLite consensus disorder prediction 148 168 - -
Bisa10g0649 303 SMART B3_2 15 107 IPR003340 GO:0003677
Bisa10g0649 303 SMART B3_2 206 302 IPR003340 GO:0003677
Bisa10g0649 303 CDD B3_DNA 14 104 IPR003340 GO:0003677
Bisa10g0649 303 MobiDBLite consensus disorder prediction 139 168 - -
Bisa10g0649 303 ProSiteProfiles B3 DNA-binding domain profile. 205 303 IPR003340 GO:0003677
Bisa10g0649 303 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 14 291 IPR039218 -
Bisa10g0649 303 SUPERFAMILY DNA-binding pseudobarrel domain 199 302 IPR015300 -
Bisa10g0649 303 Gene3D - 7 109 IPR015300 -
Bisa10g0649 303 ProSiteProfiles B3 DNA-binding domain profile. 12 107 IPR003340 GO:0003677
Bisa10g0649 303 CDD B3_DNA 206 299 IPR003340 GO:0003677
Bisa10g0649 303 SUPERFAMILY DNA-binding pseudobarrel domain 13 109 IPR015300 -
Bisa10g0649 303 Gene3D - 184 303 IPR015300 -
Bisa10g0649 303 Pfam B3 DNA binding domain 207 303 IPR003340 GO:0003677
Bisa10g0649 303 Pfam B3 DNA binding domain 15 106 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0649 Bisa-ChrBisa10 14369478 14372557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0649 15 294 REM Transcription Factor Family AT4G33280 22.857 1.90e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa10g0649 B3 4.3e-10 CL0405