Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0620 ATGGCTAAGCCTAACACTAATTGTTTGGTCTACTTCTTTATCTCACTTCACATTCTCTTGAGCTCTGTGTTAGTGACCCATTCAGCACCAGAAAGTGCTCTTGTCACACACCTTCCTGGCTTCAATGGGACTTTCCCTTCCAAGCACTACGCTGGGTACGTGACAGTAGATGAAGGTCATGGAAGGAACTTGTATTACTATTTCGTGGCATCAGAAAGCAATCCCTCAAAGGATCCAGTGGTTCTATGGCTCAACGGCGGACCAGGCTGCTCTAGCTTCGATGGCTTCGTCTATGAGCACGGTCCTTTTAATTTTGAAGCAGCAGAGACCAGGGGAAGTCTTCCCAAATTGCACCTCAATCCTTACAGTTGGTCCAAGGTCTCCAACATTATATATTTAGATTCTCCTGCTGGTGTGGGGTTTTCTTACTCAAAGACTGACTCTGATTACAATACTGGAGACACAAAGACTGCCATTGATGCACATGCTTTTCTCCTCAAGTGGTTTCAACTTTACCCTGAGTTCCTTCCCAACCCGCTCTTTATTGCTGGAGAGTCTTATGCCGGAATTTATGTGCCTACTCTTGCTTATGAAATAGCCAAAGGAATTGATGCTGGTGCAAAGCCCAATCTGAATTTCAAGGGTTATATGGTAGGAAATGGTGTCACAGATGAAGAATTTGATGGCAATGCTCTTGTACCATTTACACATGGGATGGGTCTTATCTCAGATAATCTGTATGAGGACGTTGTAGCAGAGTGCAACGGAAACTTCTATAAGCCGCTCGGTCAAGCATGTTCACAAAAGCTTGCAAAAGTTGACGAGGACGTTGCAGAGTTAAATATATATGATATTCTAGAGCCATGTTTTCATGGCAATGGTGAAGAGAAAATTACAACATCAGATATTAAGTTGCCAACAAGCTTCTTGCAATTAGGTAAGACTGATAAGCCTTTGCCTGTCAGAAAGAGGATGTTTGGTCGTGCTTGGCCTCTCAGAGCTCCCGTGAGAGATGGAATTGTACCAACTTGGCCACAACTTAGCAATACGAACAATGTTCCATGCACGGATGATGAGGTTGCAACCACATGGTTGAACAATGAAATGGTTAGGGAGGCACTTCATACTGTAGAGGAAAGTGTGGTCGAAAAATGGGAGTTGTGTACCGGAAAAATTGAGTACAATCACGATACTGGGAGCATGATCAAGTACCACAGGAACCTAACTTCCAAAGGATATCGAGCACTTATATACAGTGGCGATCATGATATGTGTGTCCCCTTCACTGGAAGCCAAGCATGGACGAGAGCAATGGGGTACAAGATTGTGGATGAATGGAGGGCTTGGATTTCCAACGGCCAAGTTGCTGGGTACACTCAAGGATATGACAAAAATCTCACTTTTCTAACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAACCACAAGAGTCCTTGGATTTCTACAAACGCTTTTTGAACGGAGTGCCTTTTTGA 1500 0.4387 MAKPNTNCLVYFFISLHILLSSVLVTHSAPESALVTHLPGFNGTFPSKHYAGYVTVDEGHGRNLYYYFVASESNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAETRGSLPKLHLNPYSWSKVSNIIYLDSPAGVGFSYSKTDSDYNTGDTKTAIDAHAFLLKWFQLYPEFLPNPLFIAGESYAGIYVPTLAYEIAKGIDAGAKPNLNFKGYMVGNGVTDEEFDGNALVPFTHGMGLISDNLYEDVVAECNGNFYKPLGQACSQKLAKVDEDVAELNIYDILEPCFHGNGEEKITTSDIKLPTSFLQLGKTDKPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNTNNVPCTDDEVATTWLNNEMVREALHTVEESVVEKWELCTGKIEYNHDTGSMIKYHRNLTSKGYRALIYSGDHDMCVPFTGSQAWTRAMGYKIVDEWRAWISNGQVAGYTQGYDKNLTFLTIKGAGHTVPEYKPQESLDFYKRFLNGVPF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0620 499 FunFam Carboxypeptidase 28 312 - -
Bisa10g0620 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 466 483 IPR033124 GO:0004185
Bisa10g0620 499 Gene3D alpha/beta hydrolase 27 332 IPR029058 -
Bisa10g0620 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 483 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 Gene3D - 351 499 - -
Bisa10g0620 499 SUPERFAMILY alpha/beta-Hydrolases 35 498 IPR029058 -
Bisa10g0620 499 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Bisa10g0620 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 Pfam Serine carboxypeptidase 39 496 IPR001563 GO:0004185|GO:0006508
Bisa10g0620 499 FunFam Carboxypeptidase 354 498 - -
Bisa10g0620 499 FunFam Carboxypeptidase 401 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0620 Bisa-ChrBisa10 13790056 13799058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0620 360 499 Calmodulin-binding Proteins AT2G22960 49.286 2.32e-42 147