Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0602 ATGGATTACACGACCATTTTTGACTCCAATCTTGCACTTCTAGAATCTATCCGAAGCTATCTTCTCGACGACGATTCCGATGCTCTCGTGGCACTTCCGGCCACATTCGCCCGCGATGCTCCGGACTGCTTCCAGTTCCAGAGTCCTAACTCTGGGACGACGGAGAACAGCGATTGTGACACTAATGCTACATCTTTTTCATCGGAACCAGCAAACATTGCTGGCGCCGAGGTCTGTAGTGCTCATGGCAACCAAACTACGGCGGCGCGTGAAATTCACGCTCCAGCGAGTGGGAGGAATTACAGGGGAGTGAGGCGGAGGCCTTGGGGGAAATATGCTGCGGAGATTAGGGATCCGAAGAAGAACGGCGCGAGAGTGTGGCTCGGGACTTACGAGACGGCTGAGGACGCGGCTTTGGCTTATGATCGAGCCGCTTTCAAGATGCGCGGCTCGAAAGCCAAGCTGAACTTTCCGCATCTTATTGGCTCCAACCTGTCGGAGCAGCCCAGGGTGACCGGAAACCGCCGTCTGCCGGAGCCTTGTTCTCCGTCATCTGAGGATGAGTGGTCGGAGATGAAACGGAAGAAGAGCCGAACGATGGAGGCCGAGCCGTGGAGTTAG 621 0.5572 MDYTTIFDSNLALLESIRSYLLDDDSDALVALPATFARDAPDCFQFQSPNSGTTENSDCDTNATSFSSEPANIAGAEVCSAHGNQTTAAREIHAPASGRNYRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEDAALAYDRAAFKMRGSKAKLNFPHLIGSNLSEQPRVTGNRRLPEPCSPSSEDEWSEMKRKKSRTMEAEPWS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0602 206 MobiDBLite consensus disorder prediction 186 206 - -
Bisa10g0602 206 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 PANTHER DNA-BINDING DOMAIN 65 187 IPR044808 GO:0003700|GO:0009873
Bisa10g0602 206 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 SUPERFAMILY DNA-binding domain 100 159 IPR016177 GO:0003677
Bisa10g0602 206 MobiDBLite consensus disorder prediction 164 206 - -
Bisa10g0602 206 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Bisa10g0602 206 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 CDD AP2 100 160 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Bisa10g0602 206 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0602 Bisa-ChrBisa10 13286208 13286828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0602 87 203 AP2-EREBP Transcription Factor Family AT2G44840 63.559 1.82e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g0602 AP2 2.8e-15 CL0081