Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0596 ATGGACCAAAAAGATGTCGTCGTCAACCCCCGCGGCTGCGACTACACAACCTTGGATTTTCAACACCTGAAGGTGTTCTCCGCCCTGGGCCGCGGAGCCAAGGGTGCCGTCTTCCTCGTCAAAAACCACGACGCTTTTGGCGAGGGTTTCTTTGCCCTCAAAGTGATCTCCAAAGCTTTGCTGAACAAGAAGGCGATCAAAATTGGTAGCCATCGTGAACGTCGGAGGATTTCCGTTGAACAGCAAGTGCTACGTCGTTTTGATCACCCGCTTTTGCCTCAATTACGAGGTGTTTTGGAGAGTGAGAAAACTATTGGCTACTGCATTGACTATTGCCCAGGAGGAAGCCTTCATTCTCTCAGGAAGAAACAGCCTGACCAGACGCTTCCCGTTGATAGCATAAGGTTTTACGCTATCGAATTGGTGCTTGTATTGGAATATCTGCACAGTTTGGGGATAGTGTACAGGGATTTGAAGCCAAATAACATAATGATACAAGAAAGCGGGCACGTAATGCTCGTGGATTTCGATCTCTCCAAACAGCTCAATCCGAGGTCTCGAGGATCGTTGAGTTGCAGCACGTCGCAGAGTTCTCTCTCGGCAAAGGCCAAGCCGGAGAAGATGGAAAGAATAAAGCGACGGTTCGCTCGCTTCTTCGGTTGCTACAACTCGGTCGTCGCGCCTCATGACTGGGAATCGGAAACGGAATTAAATACTCACTCGTTGCACCGGAGCGAGTCGGACGCGGCGGAGAAGTGCCACACTTTGGTCGGAACAGAGGAGTACGTGGCGCCGGAAGTTGTATCAGGAAAAGGCCATGACTTCAGGGTTGATTGGTGGTCATTCGGCGTCGTTTTGTACGAGTTGTTGTACGGGACGACGCCGTTTAAAGGGGAGAACAGGAAACAAACGTTCAGTAGGATTTTATTGGAACCACCGGAGCTAAAGGGGGAGACGATGCCGTTGAAGGATTTGATAGGGAGGTTATTGGAAAAGGATCCAGACCGTAGGATCCAAGTAGATGAAATCAAGGGACACGATTTCTTTAGAGGAGTTATGTGGGACCAGGTTCTGGGGGTCGCACGCCCACCGTATATTCCTGAGAATGGCAATAAGGACAAGATGGGAATTAAGGAAGTTGATGTGGAGTTACTTGTCCATCGGATATTTTTAGGAAATAACGGTGAGTTTGTGAAGGATAAAAGGGTGGAGAAAAAATCCAAGACACAGAATGGTGACAATGATAAAAGAGGGTGGGTTAAGAAGTTAAATCATGCCCATGAGAATGAAAAGTTTTCGGTTTTTTGA 1308 0.4824 MDQKDVVVNPRGCDYTTLDFQHLKVFSALGRGAKGAVFLVKNHDAFGEGFFALKVISKALLNKKAIKIGSHRERRRISVEQQVLRRFDHPLLPQLRGVLESEKTIGYCIDYCPGGSLHSLRKKQPDQTLPVDSIRFYAIELVLVLEYLHSLGIVYRDLKPNNIMIQESGHVMLVDFDLSKQLNPRSRGSLSCSTSQSSLSAKAKPEKMERIKRRFARFFGCYNSVVAPHDWESETELNTHSLHRSESDAAEKCHTLVGTEEYVAPEVVSGKGHDFRVDWWSFGVVLYELLYGTTPFKGENRKQTFSRILLEPPELKGETMPLKDLIGRLLEKDPDRRIQVDEIKGHDFFRGVMWDQVLGVARPPYIPENGNKDKMGIKEVDVELLVHRIFLGNNGEFVKDKRVEKKSKTQNGDNDKRGWVKKLNHAHENEKFSVF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0596 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Bisa10g0596 435 Pfam Protein kinase domain 25 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0596 435 Pfam Protein kinase domain 250 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0596 435 Gene3D Phosphorylase Kinase; domain 1 23 115 - -
Bisa10g0596 435 Gene3D Transferase(Phosphotransferase) domain 1 249 368 - -
Bisa10g0596 435 Gene3D Transferase(Phosphotransferase) domain 1 116 194 - -
Bisa10g0596 435 SMART serkin_6 23 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0596 435 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Bisa10g0596 435 FunFam Serine/threonine-protein kinase OXI1 116 184 - -
Bisa10g0596 435 SUPERFAMILY Protein kinase-like (PK-like) 23 368 IPR011009 -
Bisa10g0596 435 ProSiteProfiles Protein kinase domain profile. 23 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0596 435 PANTHER FLIPPASE KINASE 1-RELATED 17 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0596 Bisa-ChrBisa10 13200404 13201850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0596 17 435 AGC Kinase Gene Family AT3G25250 53.191 2.15e-139 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa10g0596 Pkinase 7.4e-30 CL0016