Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0589 ATGGATAACGATTTCTTCCTAAATGCTGGAATCCTCCCTGCTCTGCACTTCGAGCCTTCGTCTTCTTCTTCTCCTTCAATGCCGACGTGGCAATCGCTGTCGTCCGCCATGGATATTCAGCCCCAACAAGATTGGTCAACCACGGATCACCACGGCCTTCAATTCGATTCCGCCCTGAGCTCGATGGTTTCTTCGCCGGCAGCTTCGAACTCCAATTTGTCCGGCGACAATTTCGTCATCAGAGAATTGATCGGGAAATTGGGGAACATCGGGAGCTCCATGGAGATCGGGAATAACAGCACGAACACTTCGTGTTACAGCACGCCTCTGAGTTCGCCTCCGAAACTCAACATTCCTCCATTGGTGGGTTTGAATTCCAGTGTGGCGGAGTTCTCGGCTGATCCTGGGTTCGCAGAGAGAGCTGCCAAGTTTTCTTGCTTCGGAAGTAGGAGCTTCAATGGCAGAACGACGACGACGAGCCAAATTGGGATTAACAACAATGCTGAGTTGGCTCTGCGATCTATGCAAAATGGGAAGCTCTCTAGAGTCTCAAGTAGCCCCTCTCTGAAAGCACTTGGATCTCAAGTAGAAAATAAGAATTCTCCTTTGCATTCTCAAGAGGAATCCACAATCTCTGAGCAAAACCCTAATGGGGAATCTGGGTTTAAACCTTCCCCTGATATGAATTCCAGAAAGAGAAAAGCTTCTTCCAAGGCAAAATCCAAAGAAACTTCAACCCCTTCCAATCCTCCCAAGGCTGGTGAAGCTAATGAGGATTCAAATGCAAAGCGAAGCAAGCCAAACGAAGGTGAAGGAAATGATAACGGCCATGTGAAGTCAGAGGAAGAGCCAAAAGGAGGAAGAAGTAATGCAGGGGAGGAGAAGCAGAACAAGAGCAATAATAACTCAAAACCTCCTGAGCCTCCGAAGGACTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGTAAGAAGGGAGAAAATCAGTGAGAGGATGAAGCTTCTGCAAGATCTTGTACCAGGTTGCAATAAGGTTACTGGGAAAGCTCTAATGCTGGATGAGATCATAAACTATGTCCAGTCATTGCAGCGTCAAGTTGAGTTTTTGTCAATGAAATTGGCTTCTGTGAACACCAGGGATGATTTGAGCATTGACAATCTCATCTCAAAAGATATATTTCAATCAAACAATAACTGTTTGGCACACCCAGCGGCAATATTCCCCATGGATTCCTCAGCCCGAGGCTTTTATGGGCAGAGCCACCCAGCAATCCACAATAACGTTCCTAATGGAACCCACTGCTCAGTGGAATCTTTAGATACTGCTCTGTGCCAAAGCCTTGGCATGCAGCTACCTCCACTAAATGGGTTTCATGAAGGTGGATCCCAGTATCCTATGACTTTCTGTGAGGATGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGAAAATAGGAAAACACCAACACAATCCCCAAACTTCAATGGTTCAAATCAATTACCTAATATGAAAGTTGAGCTTTGA 1557 0.4611 MDNDFFLNAGILPALHFEPSSSSSPSMPTWQSLSSAMDIQPQQDWSTTDHHGLQFDSALSSMVSSPAASNSNLSGDNFVIRELIGKLGNIGSSMEIGNNSTNTSCYSTPLSSPPKLNIPPLVGLNSSVAEFSADPGFAERAAKFSCFGSRSFNGRTTTTSQIGINNNAELALRSMQNGKLSRVSSSPSLKALGSQVENKNSPLHSQEESTISEQNPNGESGFKPSPDMNSRKRKASSKAKSKETSTPSNPPKAGEANEDSNAKRSKPNEGEGNDNGHVKSEEEPKGGRSNAGEEKQNKSNNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRDDLSIDNLISKDIFQSNNNCLAHPAAIFPMDSSARGFYGQSHPAIHNNVPNGTHCSVESLDTALCQSLGMQLPPLNGFHEGGSQYPMTFCEDDLHTIVQMGFGQTENRKTPTQSPNFNGSNQLPNMKVEL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0589 518 SMART finulus 327 377 IPR011598 GO:0046983
Bisa10g0589 518 MobiDBLite consensus disorder prediction 178 224 - -
Bisa10g0589 518 FunFam Basic helix-loop-helix transcription factor 318 390 - -
Bisa10g0589 518 MobiDBLite consensus disorder prediction 493 518 - -
Bisa10g0589 518 MobiDBLite consensus disorder prediction 241 255 - -
Bisa10g0589 518 Gene3D - 318 391 IPR036638 GO:0046983
Bisa10g0589 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 371 IPR011598 GO:0046983
Bisa10g0589 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 319 386 IPR036638 GO:0046983
Bisa10g0589 518 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 205 427 IPR024097 GO:0006355
Bisa10g0589 518 Pfam Helix-loop-helix DNA-binding domain 325 372 IPR011598 GO:0046983
Bisa10g0589 518 CDD bHLH_AtBPE_like 311 396 - -
Bisa10g0589 518 MobiDBLite consensus disorder prediction 178 312 - -
Bisa10g0589 518 MobiDBLite consensus disorder prediction 18 50 - -
Bisa10g0589 518 Coils Coil 368 388 - -
Bisa10g0589 518 MobiDBLite consensus disorder prediction 257 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0589 Bisa-ChrBisa10 13014989 13018231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0589 1 472 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 47.870 1.62e-111 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa10g0589 HLH 4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0589 10 13014989 13018231 Bisa06g0691 06 20913781 20916993 CCT