Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0586 ATGCCATCATTCCACATATCAACGACAGAGGCAAGCCGAGGAAGAAATGAGACAGCTTCAGATGCTTTTAACTCAAGCTCTTGTTCTCGCCAGTGGGAAGGAAACGATATTGTTTTAGTTAAGGAAGGACATGACTGGTTTTGTGTTCGCATCTCTCGTTGCTTCTCAAAGCTTCCTTCATTCTCTCTTCTTTTCGCACGTTCCTTAATTTTCGTGTCGCTGATGGATGAGGATTTCGATATGCCCGCGGCGGAGGAGATGAACGAGGACTTTGATCTCCCCGATGACAACCCCACTCTCAAGGTTGGGGAGGAGAAGGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTCGTCAAGGAAGGCGAAGGCTGGGACACACCCGAAGTTGGTGATGAAGTTGAAGTTCATTACACGGGAACGCTGCTTGATGGGACCCAGTTCGATTCAAGCCGCGACAGGGGAACCCCCTTCAAGTTTACGCTGGGACAAGGGCAAGTAATTAAGGGATGGGATCAAGGTATTAAAACAATGAAGAAAGGTGAAAATGCCGTTTTCACCATCCCTCCTGAGCTTGCCTACGGTGAAGGTGGTTCTCCTCCAACAATACCTCCTAATGCTACACTTCAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTGAAGGACATATGCAAAGATGGTGGCATATTTAAGAAGATTCTTGCTGAGGGAGAGAAATGGGAGAACCCCAAGGACCCTGATGAAGTTTTGGTAAAATACGAAGCTCGGCTTGAAGATGGAACAATTGTAGGAAAATCTGATGGAGTGGAGTTCACAGTTCAAGAAGGTCATTTTTGTCCTGCCTTGTCAAAGGCTGTCAAAACTATGAAGAAGGGGGAGAAAGTGCTTTTGACTGTGAAGCCACAATATGGCTTTGGTGAGAAGGGAAAGGCAGCACACGGTGATGAAGGTGCAGTTCCACCAAATGCAACGTTGCATATTAATCTCGAGTTAGTATCATGGAAGACTGTATCAGAAGTAACTGATGATAAGAAAGTTATTAAGAAGATCCTTAAAGAAGGGGAAGGATATGAGCGTCCAAATGAGGGGGCTGTTGTGAATTTGAAATTGATTGGTAAACTGCAAGATGGTACTGTTTTCTTTAAGAAGGGCCATGAGGAGGAGGAGCTGTTTGAATTCAAAACAGATGAGGAACAAGTAATTGATGGGCTTGATAGAGCTGTGATGACTATGAAGAAGGGTGAGGTGGCACTTTTGACTATTGCGCCTGAGTATGCTTTTGGTTCGTCTGAGTCCAAGCAGGATTTGGCTGTTATCCCTCCTAACTCAACCGTTTATTACGAGGTTGAGCTTGTATCATTCGTGAAGGAGAAGGAATCCTGGGATATGAACACTCCGGAGAAAATTGAAGCTGCTGGAAAGAAGAAAGAAGAAGGGAATGTGTTGTTTAAGAGTGGAAAATATGCTAGAGCTTCTAAAAGATATGAGAAGGCTGTAAAGTTCATTGAATATGATTCCTCCTTCAGCGAGGAGGAGAAAAAGCAGGCCAAGGCATTGAAGGTCGCTTGCAATTTGAACAATGCGGCTTGCAAGTTGAAGTTAACGCAGTATAAAGAAGCAGAGAAATTATGCACTAAGGTGCTAGACCTCGAAAGCAGAAACGTGAAGGCACTCTATAGAAGGGCCCAGGCCTATATCCAGATGGCTGATTTGGATTTGGCTGAATTGGACATAAAGAAAGCTCTCGAGATTGACCCTGATAACAGGGATGTCAAGCTGGAGTACAAGACCTTGAAGGAAAAGATGAAGGAGTATAACAAAAAGGAGGCCAAATTTTATGGCAATATGTTTGCTAAGATGAATAAGCTTGAGTCACTTGACAGCAATAAACCAGCGACAAAAGGTGCTGAGCCTATGAGTATTGACAGCAAGGCATAA 1938 0.4432 MPSFHISTTEASRGRNETASDAFNSSSCSRQWEGNDIVLVKEGHDWFCVRISRCFSKLPSFSLLFARSLIFVSLMDEDFDMPAAEEMNEDFDLPDDNPTLKVGEEKEIGKQGLKKKLVKEGEGWDTPEVGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAVFTIPPELAYGEGGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILAEGEKWENPKDPDEVLVKYEARLEDGTIVGKSDGVEFTVQEGHFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKAAHGDEGAVPPNATLHINLELVSWKTVSEVTDDKKVIKKILKEGEGYERPNEGAVVNLKLIGKLQDGTVFFKKGHEEEELFEFKTDEEQVIDGLDRAVMTMKKGEVALLTIAPEYAFGSSESKQDLAVIPPNSTVYYEVELVSFVKEKESWDMNTPEKIEAAGKKKEEGNVLFKSGKYARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLTQYKEAEKLCTKVLDLESRNVKALYRRAQAYIQMADLDLAELDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMNKLESLDSNKPATKGAEPMSIDSKA 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0586 645 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 246 335 IPR001179 GO:0003755
Bisa10g0586 645 SUPERFAMILY FKBP-like 108 229 - -
Bisa10g0586 645 Gene3D - 336 457 IPR046357 GO:0003755
Bisa10g0586 645 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 363 455 IPR001179 GO:0003755
Bisa10g0586 645 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 218 IPR001179 GO:0003755
Bisa10g0586 645 Coils Coil 588 608 - -
Bisa10g0586 645 FunFam Peptidylprolyl isomerase 336 457 - -
Bisa10g0586 645 SUPERFAMILY FKBP-like 340 472 - -
Bisa10g0586 645 Pfam Tetratricopeptide repeat 555 588 IPR001440 GO:0005515
Bisa10g0586 645 Gene3D - 222 335 IPR046357 GO:0003755
Bisa10g0586 645 FunFam Peptidylprolyl isomerase 222 335 - -
Bisa10g0586 645 PANTHER PEPTIDYLPROLYL ISOMERASE 104 220 - -
Bisa10g0586 645 SMART tpr_5 472 505 IPR019734 GO:0005515
Bisa10g0586 645 SMART tpr_5 555 588 IPR019734 GO:0005515
Bisa10g0586 645 SMART tpr_5 521 554 IPR019734 GO:0005515
Bisa10g0586 645 ProSiteProfiles TPR repeat profile. 555 588 IPR019734 GO:0005515
Bisa10g0586 645 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 241 332 IPR001179 GO:0003755
Bisa10g0586 645 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 126 215 IPR001179 GO:0003755
Bisa10g0586 645 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 357 452 IPR001179 GO:0003755
Bisa10g0586 645 SUPERFAMILY TPR-like 461 621 IPR011990 GO:0005515
Bisa10g0586 645 SUPERFAMILY FKBP-like 222 338 - -
Bisa10g0586 645 Gene3D Tetratricopeptide repeat domain 458 615 IPR011990 GO:0005515
Bisa10g0586 645 FunFam Peptidylprolyl isomerase 103 221 - -
Bisa10g0586 645 Gene3D - 102 221 IPR046357 GO:0003755
Bisa10g0586 645 MobiDBLite consensus disorder prediction 1 28 - -
Bisa10g0586 645 FunFam Peptidylprolyl isomerase 460 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0586 Bisa-ChrBisa10 12974050 12982258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0586 90 645 Calmodulin-binding Proteins AT5G48570 80.859 0.0 902