Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa10g0584 | ATGGATTCCAACCCAGCTACCCATGATATGACTAAAGCCGGGGTCTATGATTGCCTTAAGCTTTCTGTTGAAGATATAGGTGATACAATGGTATATTGTGATCTTGCTGGAGACAGAGAAATGAGTTCTTGGGCTCCAGCATCTGTTTTTACTAATCAACATTTTCCATTTTCTGCTGCTATTACTGAATCTTCCATTACTACCAAATGCAGCACCAGTTTTATATGTAGAAGTCCAAGCAGAGGAAAATGCTATCTCTCAATTGGTGAGGACCGATATAAAGTCAGGAAACTCAGGATTACAGGTGTAATTAAATCTAGTGGAGGATTATCAAACTTGCAGACCCAACGAGGGACTTGGGAAGAACCTGATGATGGCAGTGGAAGTGAGTATGATGATGAAGAAGAAGATGAGCAAACAGAGGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAAGAGACAGCAGCTTCAGCTGTTTATGATGTTATTTCAGCGGACAAGTATGAGGAGAATATTAAGAAAGAGGTTGAACAGCTTTTGGAGCCAGAAGAAAGAGCAGTCTTGGAACAGAATGTAACCCCTAACGTGGAAAAAATATCAACTGCAAAATGGAGCCCACTGCACACTTTAGCACTATCAACACAGATAAGGTGCATGGATAGGCTGCTTGAAAATGGTGTTGATATTGATTTTATAAACGTGGAAGGTCTCACTGCACTTCATAAAGCAATTATAGGAAAAAAAGAAGCTGTTATAAGCCATCTTTTACGAAAAGGTGCTAGTCCTCATGTCAAGGATAAGGATGGTGCTACCCCACTTCATTATGCAGTTCAAGTTGGTGCCAAGCAAACTGTAAAGTTGTTGATCAAATATAAGGTTGACGTCAATGTTGCAGATAATGAAGGTTGGACTCCACTGCACATTGCCATTCAAAGCAGAAATAGAGATATAGCAAAAATTTTGTTGGTACATGGCGCAGATAAGTCAAGAAGAAATAAGGATGGGAAAACTGCTCTGGATCTGAGTTTATGTTATGGGAAGGACTTCAAATCTTATGACCTTGCCAAATTACTGAAGGTAATTCCAGCTAACCGAGATCTATGA | 1110 | 0.3991 | MDSNPATHDMTKAGVYDCLKLSVEDIGDTMVYCDLAGDREMSSWAPASVFTNQHFPFSAAITESSITTKCSTSFICRSPSRGKCYLSIGEDRYKVRKLRITGVIKSSGGLSNLQTQRGTWEEPDDGSGSEYDDEEEDEQTEDENYGFESDWEEEETAASAVYDVISADKYEENIKKEVEQLLEPEERAVLEQNVTPNVEKISTAKWSPLHTLALSTQIRCMDRLLENGVDIDFINVEGLTALHKAIIGKKEAVISHLLRKGASPHVKDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVADNEGWTPLHIAIQSRNRDIAKILLVHGADKSRRNKDGKTALDLSLCYGKDFKSYDLAKLLKVIPANRDL | 369 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa10g0584 | 369 | PANTHER | ANKYRIN REPEAT FAMILY PROTEIN | 134 | 361 | - | - | |
| Bisa10g0584 | 369 | Gene3D | - | 167 | 273 | IPR036770 | - | |
| Bisa10g0584 | 369 | Gene3D | - | 274 | 363 | IPR036770 | - | |
| Bisa10g0584 | 369 | MobiDBLite | consensus disorder prediction | 111 | 150 | - | - | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat region circular profile. | 270 | 302 | - | - | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat region circular profile. | 237 | 269 | - | - | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat profile. | 303 | 335 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat profile. | 270 | 302 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | Pfam | Ankyrin repeats (3 copies) | 252 | 333 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | SUPERFAMILY | Ankyrin repeat | 196 | 348 | IPR036770 | - | |
| Bisa10g0584 | 369 | MobiDBLite | consensus disorder prediction | 125 | 150 | - | - | |
| Bisa10g0584 | 369 | SMART | ANK_2a | 237 | 266 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | SMART | ANK_2a | 336 | 369 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | SMART | ANK_2a | 204 | 233 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | SMART | ANK_2a | 270 | 299 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | SMART | ANK_2a | 303 | 332 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | PRINTS | Ankyrin repeat signature | 271 | 286 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | PRINTS | Ankyrin repeat signature | 319 | 333 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat profile. | 237 | 269 | IPR002110 | GO:0005515 | |
| Bisa10g0584 | 369 | ProSiteProfiles | Ankyrin repeat region circular profile. | 303 | 335 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa10g0584 | 251 | 331 | Ion Channels | AT2G25600 | 44.444 | 1.69e-12 | 67.0 |