Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0545 ATGCTGTCTCTCTTCTCGTATACCTGGCACATGTATTCTGTCTCTGATTTCCTCCTGAACCCCATTTTCTTGCATGGCATCATGGGTTTTCTCCACCTCGTATTGTTACTAACGGTGGTTGTCTTGTGGGTGCGCAAGAAAATCACAGTAAACATCATTATCTATGAACAACAAGTTACTTTACCAATTCAATACTTAGTTTCTGATGCCGTCTCCGTTTTTTCGGGTTTAATTTTCGGTTTCATGGGGGTTTATGCCATGGACAAGAGTGAAAATGAGATTTTTGAAGAACCCCTTTTGAATGTTAATCAAGAAAATACTCCTAATTTGTCAACCAAAGGGAGTGAAACTGTTACTCCTTATTCAAATGCTGGAATTTTCAGCATTCTCACTTTCTCTTGGATGGGTCCTCTAATTGCTGTTGGTAATAAGAAAACCCTAGACCTTGAGGATGTCCCACAACTTGCTAGCCACAATAGTGCATTCAGAACTTTTCCGAGCTTCAAGAATAGGGTTGAGGCAGATTGTGGTACAATTAGCCGAGTGACCATAGTTAGGCTGATGAAGTTGTTGATACTCTCGGCGTGGAAAGAGATAGTCTTGACAGCTATTTTAGCGACTTTAAACACTTTGGCTTGTTATGTTGGTCCTTTTCTTATTGACACTTTTGTTCAATACCTCAATGGACACAGGGAATTGAAGAATGAAGGCTATCTTTTGGTGTCTGCATTTTTTGTTGCAAAGTTAACCGAGTGCCTTACGCAGAGGCATTTTTTCTTCAGATTTTACCAAGTTGGAATTAAAATCCGAGCAATTCTAGTGACAGTCATCTACAACAAAGGCTTGACACTTCCATGTCAGTCTAAGGAGGGACAAAGTACAGGGGAAATTATCAATTTCATGGCTGTCGATGCTGAAAGAATCAGCGATTTCACTTGGCACATTGTTAATGTGTGGATAGTACTTCTAAATATCACATTGGCTTTGTCAATCTTATATAAAAATCTCGGCATTGCTTCTGTTGCTGCTTTTGTTACAACTGTTATTGTGATGCTGGGAAATATTCCCTTGGGATCGTTGCAAGAGAGGTTTCAAAACAAGTTGATGGAGTCAAAAGACAGAAGAATGAAAGCCACTTCTGAAATTTTAAGGAGCATGAGAATTCTCAAACTACAAGGATGGGAGTTAAGGTTTCTGTCTAAGATAACTGAAATGAGGAAGACCGAGGAAGGCTGGTTGAAAAAGTATGTTTACACTTCTGCCATGACCACGTTTGTCTTCTGGATCGCCCCCACATTTGTTTCCGTGATTACTTTCTGTACTTGCATGCTCGTAGGAATCCCACTCGAATCTGGGAAGATCTTATCTGCACTTGCAACATTCAGAATCCTTCAAGAGTCCATCAATAGTCTTCCTGAAACAATCTCAATGATAGCCGAGATAAAGGTCTCTCTCGATAGGATTGTATCATTCCTTCGCATTGAAGACTTGAATTCTAATGCCATAGAGAAGCTTCCTAGGGGTATTACCAACAAAGCAATAGAAATAACCAATGGACATTTCTCTTGGGACTTGGACTTATCTTCCCAAAATACAACATTGAGAGATATAAATCTTACAGTTTTTCATGGAATGAGTGTTGCAGTTTGTGGTACTGTAGGGTCGGGCAAGTCTAGTTTACTTGCTTGCATACTCGGAGAAGTACTGAAGGTACGAGGTTGTACAAGGGTGTGTGGATCCATGGCCTATGTTGCTCAGTCACCATGGATACAAAGTGGAACTATAAAAGAGAATATACTGTTCTGTAAGAAGATGGATCAGGAAAGTTATGAGAAGGTCCTTCAAGCATGTTCCCTAAAGAAGGACTTGGAGATTCTATCATTTGGTGATCAGACAGTTATAGGAGAGAGGGGTATAAACTTGAGTGGAGGATCTCACTTCTTTAAGGAATGTTTGCTGGGCTTTTTAAGTCCAAAGACAGTGATTTTTGTCACTCATCAAGTAGAGTTCTTACCAGCTGCTGACCTAATCCTGGTCATGAAAGATGGGAAAATTACTCAATCTGGAAAGTACAACGATATGCTCAACTCTGGGACTGATTTCATGGAACTTGTTGGTTCACATAAAGAAGCTTTATCTGCACTTGATTCACTGTATAAAGAAACAGTCTCTAATAAATTAAGCACCTCAGAAAAAGATAATGCTCAAGGTTTTGAAGAAAATGAAGAAAACAAAGATGTGATAACTGATAAACCGGACGAGATAGTTGAGCAGAAAGGCCAACTTGTTCAAGAAGAAGAAAGAGAGAAGGGTAAAGTTGGGTTCTCAGTGTACTGGAAATATATAACAACTGCATATGGAGGAGCTCTGGCACCATTGATATTGTTGGCTCATGTTCTGTTTGAGCTTCTGCAAATTGGAAGCAACTATTGGATAGCTTGGGCTACTCCAGTTCTAACCGAAGAGAAAGCAAGTACTAAACCTTATACACTTATAATTGTCTATGCTGCTTTGTCTTTAGCAAGTTCTTTCTGCATCCTCTCCAGAGCAATGCTTCTTGCTACAGCTAGTTTCAAGACAGCTTCTATACTCTTTAATAAAATGCACTTCTGTATTTTTCGTGCCCCCATTTCGTTCTTCGATGCAACCCCGAGTGGAAGACTCCTTAACAGAGCTTCCACAGACCAAAGCGCTGTGGATACAATAATTCCCAATAAAATTGGTGGATTTGCTTTCTCTATGATTCAACTCCTAGGAATTATAGCTGTGATGTCACAGGTTGCATGGCCTGTTTTATTCATCTTTATACCAGTGATCTTGATCAGCATTTGGTATCAGGCTCGTCATGCTCCTCACTTGCCACTTGTGTTGCATGGTCTGACATGCAGATTTCCTGGAGGACGAAAAACTGGGATTGTTGGGAGAACCGGAAGTGGCAAATCAACTATGATACAAGCACTTTTCCGAATAGTTGAGCCCGCTGCCGGACAAATTTTCATAGATGGCATCAACATCTCTTCAATTGACCTTCATGATTTGAGGTCTAGACTTAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGCACTGTAAGGAGTAATCTGGACCCACTGCAAGAGTATAGAGACGAAGAAATTTGGGAGGTTCTGGATAAGTGTCAACTTGGGGATGAAGTTAGGAACAAAGAAGGAAAGCTGGACTCTCGAGTTTGGGAAAATGGAGAGAACTGGAGCATGGGCCAGAGGCAATTGGTGTGTCTTGGTAGGGTTCTACTCAAAAGAAGTGAAGTGTTGGTGCTTGATGAAGCTACTGCTTCAGTTGATACCACTACAGATAATTTGATTCAGCAAACTGTTAGGCAACACTTCTCTGAGTGTACAGTTATTACAATTGCTCATCGGATTACTTCGGTTCTTGACAGCGATATGGTTCTCCTTCTTAATCAAGCTCAGAATTCCATAGCTTTCTGGGTGTACACGTATATTTATAGTTGCCCCAAATTTGCTTATACCTCTATAGTTAATGTTGATGTAATTTTATTGTACAACTTCATGGGCATTAATACAGGAGTAATAGAAGAGTATGACTCTCCAACAAGATTGCTGCAGAACAAGTCTTCATCTTTTGCCCAGCTTGTTGCAGGGTACACTATAAGCTCCACCTCCAATTTTGAAAATTAG 3681 0.4026 MLSLFSYTWHMYSVSDFLLNPIFLHGIMGFLHLVLLLTVVVLWVRKKITVNIIIYEQQVTLPIQYLVSDAVSVFSGLIFGFMGVYAMDKSENEIFEEPLLNVNQENTPNLSTKGSETVTPYSNAGIFSILTFSWMGPLIAVGNKKTLDLEDVPQLASHNSAFRTFPSFKNRVEADCGTISRVTIVRLMKLLILSAWKEIVLTAILATLNTLACYVGPFLIDTFVQYLNGHRELKNEGYLLVSAFFVAKLTECLTQRHFFFRFYQVGIKIRAILVTVIYNKGLTLPCQSKEGQSTGEIINFMAVDAERISDFTWHIVNVWIVLLNITLALSILYKNLGIASVAAFVTTVIVMLGNIPLGSLQERFQNKLMESKDRRMKATSEILRSMRILKLQGWELRFLSKITEMRKTEEGWLKKYVYTSAMTTFVFWIAPTFVSVITFCTCMLVGIPLESGKILSALATFRILQESINSLPETISMIAEIKVSLDRIVSFLRIEDLNSNAIEKLPRGITNKAIEITNGHFSWDLDLSSQNTTLRDINLTVFHGMSVAVCGTVGSGKSSLLACILGEVLKVRGCTRVCGSMAYVAQSPWIQSGTIKENILFCKKMDQESYEKVLQACSLKKDLEILSFGDQTVIGERGINLSGGSHFFKECLLGFLSPKTVIFVTHQVEFLPAADLILVMKDGKITQSGKYNDMLNSGTDFMELVGSHKEALSALDSLYKETVSNKLSTSEKDNAQGFEENEENKDVITDKPDEIVEQKGQLVQEEEREKGKVGFSVYWKYITTAYGGALAPLILLAHVLFELLQIGSNYWIAWATPVLTEEKASTKPYTLIIVYAALSLASSFCILSRAMLLATASFKTASILFNKMHFCIFRAPISFFDATPSGRLLNRASTDQSAVDTIIPNKIGGFAFSMIQLLGIIAVMSQVAWPVLFIFIPVILISIWYQARHAPHLPLVLHGLTCRFPGGRKTGIVGRTGSGKSTMIQALFRIVEPAAGQIFIDGINISSIDLHDLRSRLSIIPQDPTMFEGTVRSNLDPLQEYRDEEIWEVLDKCQLGDEVRNKEGKLDSRVWENGENWSMGQRQLVCLGRVLLKRSEVLVLDEATASVDTTTDNLIQQTVRQHFSECTVITIAHRITSVLDSDMVLLLNQAQNSIAFWVYTYIYSCPKFAYTSIVNVDVILLYNFMGINTGVIEEYDSPTRLLQNKSSSFAQLVAGYTISSTSNFEN 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0545 1226 CDD ABC_6TM_ABCC_D1 201 488 IPR044746 GO:0140359
Bisa10g0545 1226 SUPERFAMILY ABC transporter transmembrane region 187 488 IPR036640 GO:0005524|GO:0016020
Bisa10g0545 1226 Pfam ABC transporter 534 645 IPR003439 GO:0005524
Bisa10g0545 1226 CDD ABCC_MRP_domain1 514 684 - -
Bisa10g0545 1226 SMART AAA_5 966 1150 IPR003593 GO:0016887
Bisa10g0545 1226 SMART AAA_5 543 684 IPR003593 GO:0016887
Bisa10g0545 1226 CDD ABCC_MRP_domain2 945 1149 - -
Bisa10g0545 1226 Gene3D ABC transporter type 1, transmembrane domain 159 497 IPR036640 GO:0005524|GO:0016020
Bisa10g0545 1226 FunFam ABC transporter C family member 10 183 496 - -
Bisa10g0545 1226 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 121 644 - -
Bisa10g0545 1226 MobiDBLite consensus disorder prediction 730 751 - -
Bisa10g0545 1226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 200 480 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0545 1226 MobiDBLite consensus disorder prediction 733 751 - -
Bisa10g0545 1226 Gene3D - 949 1155 IPR027417 -
Bisa10g0545 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 949 1149 IPR027417 -
Bisa10g0545 1226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 793 944 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0545 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 706 IPR027417 -
Bisa10g0545 1226 Gene3D - 498 645 IPR027417 -
Bisa10g0545 1226 Gene3D - 646 727 IPR027417 -
Bisa10g0545 1226 FunFam Multidrug resistance-associated protein member 4 941 1157 - -
Bisa10g0545 1226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 514 748 IPR003439 GO:0005524
Bisa10g0545 1226 Pfam ABC transporter transmembrane region 794 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0545 1226 Pfam ABC transporter transmembrane region 201 466 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa10g0545 1226 Pfam ABC transporter 957 1105 IPR003439 GO:0005524
Bisa10g0545 1226 SUPERFAMILY ABC transporter transmembrane region 778 947 IPR036640 GO:0005524|GO:0016020
Bisa10g0545 1226 Gene3D ABC transporter type 1, transmembrane domain 728 948 IPR036640 GO:0005524|GO:0016020
Bisa10g0545 1226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 938 1214 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0545 Bisa-ChrBisa10 12181842 12191675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0545 514 735 Calmodulin-binding Proteins AT2G36910 21.723 1.36e-10 64.3