Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0544 ATGAACACTCATTCTCCTAGGGGGCGTACCCTCAGAAGTTACAGGCGGAGGAAGGTAGTTTTGGATTTGGATCTTAATAGAGCTCCACCTGGTGAGAGTCGGGAGCAGGAGGGTCCTTCAACTCTACCTGAACATCAAGTAGTTGAAGCTGTGCAGCAACCACACGTTGTGCAGCCTATTGATGTGGAGACCATTGATGATGATGTTGTTGAATCTACACCAAGTGCTTTTGCTGAGGCTAGAATCAATTCAAGAAGGAATCGTAGGAGGACTATAGTTGATGTGGATTTAGAAGATCCCAGCAATGGCAGAAGAGGTTCTCCGAACCAAACAATTATTAATTGTGATCTATATATAAACTTAGAAGGCAGTGGCAGTTCTGTGAGTGGGAATGTTAGTAAGGAACCTGAACCTCCAAAGGAACCTATCTTTAACTGTCCAATATGTATGGGTCCACTGGTAGAAGAAATGTCAACAAGGTGTGGTCATATTTTTTGTAAGAACTGTATTAAGGCTGCACTAGGTGCACAGGGTAAATGCCCTACATGTAGAAAGAAAGTCACTGTGAAAGAGCTTATAAGAGTGTTTCTTCCGACTACTAGTTGA 606 0.429 MNTHSPRGRTLRSYRRRKVVLDLDLNRAPPGESREQEGPSTLPEHQVVEAVQQPHVVQPIDVETIDDDVVESTPSAFAEARINSRRNRRRTIVDVDLEDPSNGRRGSPNQTIINCDLYINLEGSGSSVSGNVSKEPEPPKEPIFNCPICMGPLVEEMSTRCGHIFCKNCIKAALGAQGKCPTCRKKVTVKELIRVFLPTTS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0544 201 SMART ring_2 146 183 IPR001841 -
Bisa10g0544 201 SUPERFAMILY RING/U-box 145 190 - -
Bisa10g0544 201 MobiDBLite consensus disorder prediction 21 42 - -
Bisa10g0544 201 Pfam Zinc finger, C3HC4 type (RING finger) 145 183 - -
Bisa10g0544 201 PANTHER ELFLESS, ISOFORM B 1 201 - -
Bisa10g0544 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 199 IPR013083 -
Bisa10g0544 201 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Bisa10g0544 201 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0544 Bisa-ChrBisa10 12176387 12177592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0544 9 200 C3H Transcription Factor Family AT5G48655 49.261 3.70e-46 149