Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0503 ATGATAAAAACGATAAACTTCTTTCGAATTTTAGCGAATTTGGTTTCCTTCTTTCGTTCGCAGGTTGACAGTCGACCGCTCGTCCTTCGCACCGGCGCCGGTCAGCCGCCTATCTCCCTTTCTCGTCGATTCGCTCAGCCGCGCCCCGATCCACTGTCCACTCATCGTCTTCTTCCTCTTGGACATGGACCTCTTGTGTGGCTTGCAAGAGTTTTTCTGTCTTGTTACATTCTGGTTCTTTTCTTTTTGGTTGGAAAACCAGAAAGAGGAAATCAATTATCAATGGGAAAGAATGAATTTCTCACGCCAAAGGCAATTGCTAATCGAATTAAAGCAAAAGGGCTGCAGAAGCTTAGATGGTACTGCCAGATGTGCCAGAAGCAATGCCGAGATGAGAATGGGTTTAAGTGTCACTGCATGAGTGAGGGTCACCAGCGACAAATGCAAATCTTTGGGCAAAACCAAAATCGCATTATTGAGGGCTACACCGAAGAATTTGAGAAAACATTCCTTGAGCACATGAAGCGCAGCCACAGATTCAGTCGTGTAGCAGCTACAGTGGTGTATAATGAGTACATTAGTGACAGGCACCACATTCATATGAATTCCACTGAGTGGGCTACACTTACTGAGTTTGTCAAGTATTTGGGTCGGACTGGCAAGTGTAAGGTTGAAGAAACACCAAAGGGTTGGTTTATCACATACATAGATAGAGATTCAGAGACTCTCTTCAAAGAGAGGATGAAGAATAAGAGAATAAGGGCAGACATGGCAGAAGAAGAGAAGCAAGAGAAGGAGATAAGAAAACAGATCGAAAAAGCTGAGCAGTTGATGCAGCCATCGACCACTGGGTCTGATCAGACCTTACAGGCCGAGCTTCCAAGGGAATTAAAGGTGGAAGATGGAGTTAAGATTGGCTTTTCTCTTGGTACATCAGCAAAACCTGTAACCAAGGAAAAACACGAGGGACCGAAGGTAGTGTTTGATGACGGTGAGGATGCAAGAAATGAAGAACGGAACCCCAGAGGCTCTTTGAAGAGGAAAGAGAGTGGTAGTGGAAAATCAACATTGGATGAATTGATGAGGGAGGAAGAGAAGAAAAAGGAGAAAATTAATAGGAAGGATTACTGGTTGCATGAGGGAATTGTTGTGAAGGTCATGAGCAAAGCTTTGGCCGATAAAGGGTATTACAAACAGAAAGGTGTTGTTTTAAAGGTGATGGACAAATATGTTGGGGAAATACAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGAAGAACTTGAAACTGTGATTCCCCAAATTGGGGGTCTAGTGAAGATCGTAAACGGAGCGTATCGTGGATCAGTAGCAAGATTGTTAGGAGTTGATACGGATCACTTTTGTGCAAAGTTGCAGATAGAGAAAGGTCCCTATGATGGTAGAGTACTTAAGGCAATAGAATACGAGGATATTTGTAAACTGGCCCAGTGA 1479 0.4375 MIKTINFFRILANLVSFFRSQVDSRPLVLRTGAGQPPISLSRRFAQPRPDPLSTHRLLPLGHGPLVWLARVFLSCYILVLFFLVGKPERGNQLSMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNQNRIIEGYTEEFEKTFLEHMKRSHRFSRVAATVVYNEYISDRHHIHMNSTEWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIRADMAEEEKQEKEIRKQIEKAEQLMQPSTTGSDQTLQAELPRELKVEDGVKIGFSLGTSAKPVTKEKHEGPKVVFDDGEDARNEERNPRGSLKRKESGSGKSTLDELMREEEKKKEKINRKDYWLHEGIVVKVMSKALADKGYYKQKGVVLKVMDKYVGEIQMLESKHVLRVDQEELETVIPQIGGLVKIVNGAYRGSVARLLGVDTDHFCAKLQIEKGPYDGRVLKAIEYEDICKLAQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0503 492 Pfam Domain of Kin17 curved DNA-binding protein 146 271 IPR019447 -
Bisa10g0503 492 SUPERFAMILY beta-beta-alpha zinc fingers 120 155 IPR036236 -
Bisa10g0503 492 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 95 491 IPR037321 -
Bisa10g0503 492 SMART Kin17_mid_2 146 272 IPR019447 -
Bisa10g0503 492 FunFam DNA/RNA-binding protein kin17-like 381 434 - -
Bisa10g0503 492 Coils Coil 354 374 - -
Bisa10g0503 492 MobiDBLite consensus disorder prediction 315 365 - -
Bisa10g0503 492 Gene3D - 154 254 IPR038254 -
Bisa10g0503 492 FunFam DNA/RNA-binding protein KIN17, putative 155 254 - -
Bisa10g0503 492 Gene3D - 435 491 IPR014722 -
Bisa10g0503 492 CDD KOW_KIN17 437 490 IPR041995 -
Bisa10g0503 492 Pfam KN17 SH3-like C-terminal domain 373 426 IPR041330 -
Bisa10g0503 492 Gene3D - 381 434 - -
Bisa10g0503 492 MobiDBLite consensus disorder prediction 314 365 - -
Bisa10g0503 492 FunFam DNA/RNA-binding protein KIN17, putative 435 491 - -
Bisa10g0503 492 Coils Coil 248 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0503 Bisa-ChrBisa10 11144160 11148319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0503 95 491 C2H2 Transcription Factor Family AT1G55460 71.117 0.0 587